Cluster: MGYG000004899_CGC77
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_02733
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004899_19 | MGYG000004899_19_3 | 3553 | 4986 | - | GH28 |
| NULL(UNKNOWN) | MGYG000004899_19 | MGYG000004899_19_4 | 5175 | 5702 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_5 | 5824 | 7218 | + | GH28 |
| pfam | MGYG000004899_19 | MGYG000004899_19_6 | 7233 | 8354 | + | AhpC-TSA | Redoxin | Thioredoxin_8 |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_7 | 8424 | 10343 | + | GH146 |
| NULL(UNKNOWN) | MGYG000004899_19 | MGYG000004899_19_8 | 10414 | 12009 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004899_19 | MGYG000004899_19_9 | 12092 | 14095 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004899_19 | MGYG000004899_19_10 | 14213 | 15994 | - | 8.A.46.1.3 |
| TC | MGYG000004899_19 | MGYG000004899_19_11 | 16008 | 19103 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_12 | 19154 | 21619 | - | GH2 |
| TF | MGYG000004899_19 | MGYG000004899_19_13 | 21746 | 24562 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_14 | 24689 | 26632 | + | GH97 |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_15 | 26747 | 28357 | + | CBM91 | GH43_10 |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_16 | 28371 | 29588 | + | GH88 |
| STP | MGYG000004899_19 | MGYG000004899_19_17 | 29616 | 31577 | - | HATPase_c | HisKA |
| CAZyme | MGYG000004899_19 | MGYG000004899_19_18 | 31752 | 34112 | - | GH31_4 |
Gene ID: MGYG000004899_19_3
Type: CAZyme
Location: 3553 - 4986 (-)
Type: CAZyme
Location: 3553 - 4986 (-)
Gene ID: MGYG000004899_19_4
Type:
Location: 5175 - 5702 (+)
Type:
Location: 5175 - 5702 (+)
Gene ID: MGYG000004899_19_5
Type: CAZyme
Location: 5824 - 7218 (+)
Type: CAZyme
Location: 5824 - 7218 (+)
Gene ID: MGYG000004899_19_6
Type: pfam
Location: 7233 - 8354 (+)
Type: pfam
Location: 7233 - 8354 (+)
Gene ID: MGYG000004899_19_7
Type: CAZyme
Location: 8424 - 10343 (+)
Type: CAZyme
Location: 8424 - 10343 (+)
Gene ID: MGYG000004899_19_8
Type:
Location: 10414 - 12009 (+)
Type:
Location: 10414 - 12009 (+)
Gene ID: MGYG000004899_19_9
Type:
Location: 12092 - 14095 (+)
Type:
Location: 12092 - 14095 (+)
Gene ID: MGYG000004899_19_10
Type: TC
Location: 14213 - 15994 (-)
Type: TC
Location: 14213 - 15994 (-)
Gene ID: MGYG000004899_19_11
Type: TC
Location: 16008 - 19103 (-)
Type: TC
Location: 16008 - 19103 (-)
Gene ID: MGYG000004899_19_12
Type: CAZyme
Location: 19154 - 21619 (-)
Type: CAZyme
Location: 19154 - 21619 (-)
Gene ID: MGYG000004899_19_13
Type: TF
Location: 21746 - 24562 (-)
Type: TF
Location: 21746 - 24562 (-)
Gene ID: MGYG000004899_19_14
Type: CAZyme
Location: 24689 - 26632 (+)
Type: CAZyme
Location: 24689 - 26632 (+)
Gene ID: MGYG000004899_19_15
Type: CAZyme
Location: 26747 - 28357 (+)
Type: CAZyme
Location: 26747 - 28357 (+)
Gene ID: MGYG000004899_19_16
Type: CAZyme
Location: 28371 - 29588 (+)
Type: CAZyme
Location: 28371 - 29588 (+)
Gene ID: MGYG000004899_19_17
Type: STP
Location: 29616 - 31577 (-)
Type: STP
Location: 29616 - 31577 (-)
Gene ID: MGYG000004899_19_18
Type: CAZyme
Location: 31752 - 34112 (-)
Type: CAZyme
Location: 31752 - 34112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.