Cluster: MGYG000004899_CGC62
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate: beta-glucan
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_00934
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004899_13 | MGYG000004899_13_20 | 21293 | 24286 | + | GH3 |
| CAZyme | MGYG000004899_13 | MGYG000004899_13_21 | 24310 | 27324 | + | GH3 |
| pfam | MGYG000004899_13 | MGYG000004899_13_22 | 27497 | 28126 | - | OMP_b-brl |
| pfam | MGYG000004899_13 | MGYG000004899_13_23 | 28209 | 28841 | - | DUF4136 |
| CAZyme | MGYG000004899_13 | MGYG000004899_13_24 | 29046 | 31142 | - | GH97 |
| TC | MGYG000004899_13 | MGYG000004899_13_25 | 31150 | 32139 | - | 8.A.5.1.3 |
| CAZyme | MGYG000004899_13 | MGYG000004899_13_26 | 32436 | 34736 | + | GH3 |
| TF | MGYG000004899_13 | MGYG000004899_13_27 | 35092 | 35958 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004899_13 | MGYG000004899_13_28 | 36029 | 37312 | + | CE7 |
| CAZyme | MGYG000004899_13 | MGYG000004899_13_29 | 37439 | 38731 | + | GH5_7 |
| CAZyme | MGYG000004899_13 | MGYG000004899_13_30 | 38747 | 39703 | + | GH5_2 |
| TC | MGYG000004899_13 | MGYG000004899_13_31 | 40054 | 43317 | + | 1.B.14.6.1 |
Gene ID: MGYG000004899_13_20
Type: CAZyme
Location: 21293 - 24286 (+)
Type: CAZyme
Location: 21293 - 24286 (+)
Gene ID: MGYG000004899_13_21
Type: CAZyme
Location: 24310 - 27324 (+)
Type: CAZyme
Location: 24310 - 27324 (+)
Gene ID: MGYG000004899_13_22
Type: pfam
Location: 27497 - 28126 (-)
Type: pfam
Location: 27497 - 28126 (-)
Gene ID: MGYG000004899_13_23
Type: pfam
Location: 28209 - 28841 (-)
Type: pfam
Location: 28209 - 28841 (-)
Gene ID: MGYG000004899_13_24
Type: CAZyme
Location: 29046 - 31142 (-)
Type: CAZyme
Location: 29046 - 31142 (-)
Gene ID: MGYG000004899_13_25
Type: TC
Location: 31150 - 32139 (-)
Type: TC
Location: 31150 - 32139 (-)
Gene ID: MGYG000004899_13_26
Type: CAZyme
Location: 32436 - 34736 (+)
Type: CAZyme
Location: 32436 - 34736 (+)
Gene ID: MGYG000004899_13_27
Type: TF
Location: 35092 - 35958 (+)
Type: TF
Location: 35092 - 35958 (+)
Gene ID: MGYG000004899_13_28
Type: CAZyme
Location: 36029 - 37312 (+)
Type: CAZyme
Location: 36029 - 37312 (+)
Gene ID: MGYG000004899_13_29
Type: CAZyme
Location: 37439 - 38731 (+)
Type: CAZyme
Location: 37439 - 38731 (+)
Gene ID: MGYG000004899_13_30
Type: CAZyme
Location: 38747 - 39703 (+)
Type: CAZyme
Location: 38747 - 39703 (+)
Gene ID: MGYG000004899_13_31
Type: TC
Location: 40054 - 43317 (+)
Type: TC
Location: 40054 - 43317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.