Cluster: MGYG000004899_CGC47
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_00647
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004899_6 | MGYG000004899_6_72 | 103513 | 105681 | - | PL8_3 |
| CAZyme | MGYG000004899_6 | MGYG000004899_6_73 | 105964 | 108951 | + | GH105 | PL33_2 |
| TC | MGYG000004899_6 | MGYG000004899_6_74 | 109037 | 112255 | + | 1.B.14.6.1 |
| pfam | MGYG000004899_6 | MGYG000004899_6_75 | 112268 | 114115 | + | SusD_RagB | SusD-like_3 |
| sulfatase | MGYG000004899_6 | MGYG000004899_6_76 | 114395 | 115936 | + | S1_46 |
| TC | MGYG000004899_6 | MGYG000004899_6_77 | 116088 | 119342 | + | 1.B.14.6.1 |
| pfam | MGYG000004899_6 | MGYG000004899_6_78 | 119364 | 121352 | + | SusD_RagB |
| pfam | MGYG000004899_6 | MGYG000004899_6_79 | 121375 | 122538 | + | F5_F8_type_C | Big_2 |
| CAZyme | MGYG000004899_6 | MGYG000004899_6_80 | 122622 | 124991 | + | GH141 |
| TF | MGYG000004899_6 | MGYG000004899_6_81 | 125059 | 129084 | + | HTH_AraC |
| CAZyme | MGYG000004899_6 | MGYG000004899_6_82 | 129215 | 130618 | + | GH29 |
| CAZyme | MGYG000004899_6 | MGYG000004899_6_83 | 130668 | 131783 | + | GH105 |
| CAZyme | MGYG000004899_6 | MGYG000004899_6_84 | 131836 | 133950 | + | GH2 |
Gene ID: MGYG000004899_6_72
Type: CAZyme
Location: 103513 - 105681 (-)
Type: CAZyme
Location: 103513 - 105681 (-)
Gene ID: MGYG000004899_6_73
Type: CAZyme
Location: 105964 - 108951 (+)
Type: CAZyme
Location: 105964 - 108951 (+)
Gene ID: MGYG000004899_6_74
Type: TC
Location: 109037 - 112255 (+)
Type: TC
Location: 109037 - 112255 (+)
Gene ID: MGYG000004899_6_75
Type: pfam
Location: 112268 - 114115 (+)
Type: pfam
Location: 112268 - 114115 (+)
Gene ID: MGYG000004899_6_76
Type: sulfatase
Location: 114395 - 115936 (+)
Type: sulfatase
Location: 114395 - 115936 (+)
Gene ID: MGYG000004899_6_77
Type: TC
Location: 116088 - 119342 (+)
Type: TC
Location: 116088 - 119342 (+)
Gene ID: MGYG000004899_6_78
Type: pfam
Location: 119364 - 121352 (+)
Type: pfam
Location: 119364 - 121352 (+)
Gene ID: MGYG000004899_6_79
Type: pfam
Location: 121375 - 122538 (+)
Type: pfam
Location: 121375 - 122538 (+)
Gene ID: MGYG000004899_6_80
Type: CAZyme
Location: 122622 - 124991 (+)
Type: CAZyme
Location: 122622 - 124991 (+)
Gene ID: MGYG000004899_6_81
Type: TF
Location: 125059 - 129084 (+)
Type: TF
Location: 125059 - 129084 (+)
Gene ID: MGYG000004899_6_82
Type: CAZyme
Location: 129215 - 130618 (+)
Type: CAZyme
Location: 129215 - 130618 (+)
Gene ID: MGYG000004899_6_83
Type: CAZyme
Location: 130668 - 131783 (+)
Type: CAZyme
Location: 130668 - 131783 (+)
Gene ID: MGYG000004899_6_84
Type: CAZyme
Location: 131836 - 133950 (+)
Type: CAZyme
Location: 131836 - 133950 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004899_6_78 | vegan > omnivore | 2.42465 | 0.02328 |
| MGYG000004899_6_82 | vegan > omnivore | 1.48490 | 0.02328 |