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Cluster: MGYG000004899_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004899_3 MGYG000004899_3_230 345247 348549 + 1.B.14.6.1
pfam MGYG000004899_3 MGYG000004899_3_231 348565 350577 + SusD_RagB | SusD-like_3
CAZyme MGYG000004899_3 MGYG000004899_3_232 350706 351818 + GH43_24
CAZyme MGYG000004899_3 MGYG000004899_3_233 351866 353161 + GH154
CAZyme MGYG000004899_3 MGYG000004899_3_234 353184 354494 + PL42
CAZyme MGYG000004899_3 MGYG000004899_3_235 354514 355632 + GH105
CAZyme MGYG000004899_3 MGYG000004899_3_236 355743 357683 + GH43_19 | GH43_34
CAZyme MGYG000004899_3 MGYG000004899_3_237 357710 359659 + GH97
CAZyme MGYG000004899_3 MGYG000004899_3_238 359911 362424 + GH51_2
CAZyme MGYG000004899_3 MGYG000004899_3_239 362556 364562 + GH127
CAZyme MGYG000004899_3 MGYG000004899_3_240 364609 366549 + GH51_2
CAZyme MGYG000004899_3 MGYG000004899_3_241 366629 369757 + GH2
TF MGYG000004899_3 MGYG000004899_3_242 369926 374026 + HTH_AraC
TC MGYG000004899_3 MGYG000004899_3_243 374169 377240 + 1.B.14.6.1
TC MGYG000004899_3 MGYG000004899_3_244 377253 378875 + 8.A.46.1.3
CAZyme MGYG000004899_3 MGYG000004899_3_245 378906 380435 + GH136
TF MGYG000004899_3 MGYG000004899_3_246 380534 384667 + HTH_AraC
TC MGYG000004899_3 MGYG000004899_3_247 385086 388361 + 1.B.14.6.1
pfam MGYG000004899_3 MGYG000004899_3_248 388381 390432 + SusD_RagB | SusD-like_3
CAZyme MGYG000004899_3 MGYG000004899_3_249 390534 391670 + GH43_24
CAZyme MGYG000004899_3 MGYG000004899_3_250 391977 395291 - GH35 | GH43_24
Gene ID: MGYG000004899_3_230
Type: TC
Location: 345247 - 348549 (+)
Gene ID: MGYG000004899_3_231
Type: pfam
Location: 348565 - 350577 (+)
Gene ID: MGYG000004899_3_232
Type: CAZyme
Location: 350706 - 351818 (+)
Gene ID: MGYG000004899_3_233
Type: CAZyme
Location: 351866 - 353161 (+)
Gene ID: MGYG000004899_3_234
Type: CAZyme
Location: 353184 - 354494 (+)
Gene ID: MGYG000004899_3_235
Type: CAZyme
Location: 354514 - 355632 (+)
Gene ID: MGYG000004899_3_236
Type: CAZyme
Location: 355743 - 357683 (+)
Gene ID: MGYG000004899_3_237
Type: CAZyme
Location: 357710 - 359659 (+)
Gene ID: MGYG000004899_3_238
Type: CAZyme
Location: 359911 - 362424 (+)
Gene ID: MGYG000004899_3_239
Type: CAZyme
Location: 362556 - 364562 (+)
Gene ID: MGYG000004899_3_240
Type: CAZyme
Location: 364609 - 366549 (+)
Gene ID: MGYG000004899_3_241
Type: CAZyme
Location: 366629 - 369757 (+)
Gene ID: MGYG000004899_3_242
Type: TF
Location: 369926 - 374026 (+)
Gene ID: MGYG000004899_3_243
Type: TC
Location: 374169 - 377240 (+)
Gene ID: MGYG000004899_3_244
Type: TC
Location: 377253 - 378875 (+)
Gene ID: MGYG000004899_3_245
Type: CAZyme
Location: 378906 - 380435 (+)
Gene ID: MGYG000004899_3_246
Type: TF
Location: 380534 - 384667 (+)
Gene ID: MGYG000004899_3_247
Type: TC
Location: 385086 - 388361 (+)
Gene ID: MGYG000004899_3_248
Type: pfam
Location: 388381 - 390432 (+)
Gene ID: MGYG000004899_3_249
Type: CAZyme
Location: 390534 - 391670 (+)
Gene ID: MGYG000004899_3_250
Type: CAZyme
Location: 391977 - 395291 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004899_3_243 vegan > omnivore 1.02907 0.02328

🧭 Explore Read Mapping of CGC

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