Cluster: MGYG000004899_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_00297
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004899_1 | MGYG000004899_1_79 | 95593 | 96903 | + | 2.A.1.7.2 |
| pfam | MGYG000004899_1 | MGYG000004899_1_80 | 96963 | 98117 | + | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| CAZyme | MGYG000004899_1 | MGYG000004899_1_81 | 98216 | 99196 | - | GH43_29 |
| CAZyme | MGYG000004899_1 | MGYG000004899_1_82 | 99210 | 101186 | - | GH51_2 |
| CAZyme | MGYG000004899_1 | MGYG000004899_1_83 | 101218 | 102714 | - | GH43_4 |
| TF | MGYG000004899_1 | MGYG000004899_1_84 | 102883 | 107148 | + | HTH_AraC |
| pfam | MGYG000004899_1 | MGYG000004899_1_85 | 107617 | 109449 | + | Laminin_G_3 |
| TC | MGYG000004899_1 | MGYG000004899_1_86 | 109475 | 112594 | + | 1.B.14.6.1 |
| pfam | MGYG000004899_1 | MGYG000004899_1_87 | 112601 | 114367 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000004899_1 | MGYG000004899_1_88 | 114387 | 117596 | + | 1.B.14.6.2 |
| pfam | MGYG000004899_1 | MGYG000004899_1_89 | 117617 | 119428 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000004899_1 | MGYG000004899_1_90 | 119445 | 119882 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004899_1 | MGYG000004899_1_91 | 120068 | 121984 | + | GH43_4 |
| sulfatase | MGYG000004899_1 | MGYG000004899_1_92 | 122104 | 123243 | + | S1_22 |
| TC | MGYG000004899_1 | MGYG000004899_1_93 | 123272 | 124966 | + | 2.A.21.3.19 |
Gene ID: MGYG000004899_1_79
Type: TC
Location: 95593 - 96903 (+)
Type: TC
Location: 95593 - 96903 (+)
Gene ID: MGYG000004899_1_80
Type: pfam
Location: 96963 - 98117 (+)
Type: pfam
Location: 96963 - 98117 (+)
Gene ID: MGYG000004899_1_81
Type: CAZyme
Location: 98216 - 99196 (-)
Type: CAZyme
Location: 98216 - 99196 (-)
Gene ID: MGYG000004899_1_82
Type: CAZyme
Location: 99210 - 101186 (-)
Type: CAZyme
Location: 99210 - 101186 (-)
Gene ID: MGYG000004899_1_83
Type: CAZyme
Location: 101218 - 102714 (-)
Type: CAZyme
Location: 101218 - 102714 (-)
Gene ID: MGYG000004899_1_84
Type: TF
Location: 102883 - 107148 (+)
Type: TF
Location: 102883 - 107148 (+)
Gene ID: MGYG000004899_1_85
Type: pfam
Location: 107617 - 109449 (+)
Type: pfam
Location: 107617 - 109449 (+)
Gene ID: MGYG000004899_1_86
Type: TC
Location: 109475 - 112594 (+)
Type: TC
Location: 109475 - 112594 (+)
Gene ID: MGYG000004899_1_87
Type: pfam
Location: 112601 - 114367 (+)
Type: pfam
Location: 112601 - 114367 (+)
Gene ID: MGYG000004899_1_88
Type: TC
Location: 114387 - 117596 (+)
Type: TC
Location: 114387 - 117596 (+)
Gene ID: MGYG000004899_1_89
Type: pfam
Location: 117617 - 119428 (+)
Type: pfam
Location: 117617 - 119428 (+)
Gene ID: MGYG000004899_1_90
Type:
Location: 119445 - 119882 (+)
Type:
Location: 119445 - 119882 (+)
Gene ID: MGYG000004899_1_91
Type: CAZyme
Location: 120068 - 121984 (+)
Type: CAZyme
Location: 120068 - 121984 (+)
Gene ID: MGYG000004899_1_92
Type: sulfatase
Location: 122104 - 123243 (+)
Type: sulfatase
Location: 122104 - 123243 (+)
Gene ID: MGYG000004899_1_93
Type: TC
Location: 123272 - 124966 (+)
Type: TC
Location: 123272 - 124966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.