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Cluster: MGYG000004899_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004899_3 MGYG000004899_3_184 273535 276660 + 1.B.14.6.1
TC MGYG000004899_3 MGYG000004899_3_185 276683 278329 + 8.A.46.1.3
CAZyme MGYG000004899_3 MGYG000004899_3_186 278485 281418 + GH92
pfam MGYG000004899_3 MGYG000004899_3_187 281438 282301 + Exo_endo_phos
pfam MGYG000004899_3 MGYG000004899_3_188 282337 283479 + Alk_phosphatase | Metalloenzyme
CAZyme MGYG000004899_3 MGYG000004899_3_189 283499 285103 + GH63
CAZyme MGYG000004899_3 MGYG000004899_3_190 285116 286567 + GH125
CAZyme MGYG000004899_3 MGYG000004899_3_191 286564 288882 + GH20
Gene ID: MGYG000004899_3_184
Type: TC
Location: 273535 - 276660 (+)
Gene ID: MGYG000004899_3_185
Type: TC
Location: 276683 - 278329 (+)
Gene ID: MGYG000004899_3_186
Type: CAZyme
Location: 278485 - 281418 (+)
Gene ID: MGYG000004899_3_187
Type: pfam
Location: 281438 - 282301 (+)
Gene ID: MGYG000004899_3_188
Type: pfam
Location: 282337 - 283479 (+)
Gene ID: MGYG000004899_3_189
Type: CAZyme
Location: 283499 - 285103 (+)
Gene ID: MGYG000004899_3_190
Type: CAZyme
Location: 285116 - 286567 (+)
Gene ID: MGYG000004899_3_191
Type: CAZyme
Location: 286564 - 288882 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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