Cluster: MGYG000004899_CGC27
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_06557
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004899_3 | MGYG000004899_3_138 | 211559 | 214111 | - | GH105 |
| TC | MGYG000004899_3 | MGYG000004899_3_139 | 214225 | 215841 | - | 8.A.46.1.6 |
| TC | MGYG000004899_3 | MGYG000004899_3_140 | 215861 | 219097 | - | 1.B.14.6.1 |
| STP | MGYG000004899_3 | MGYG000004899_3_141 | 219239 | 220252 | - | FecR |
| TF | MGYG000004899_3 | MGYG000004899_3_142 | 220411 | 220959 | + | GerE |
| CAZyme | MGYG000004899_3 | MGYG000004899_3_143 | 221191 | 223413 | - | GH3 |
| CAZyme | MGYG000004899_3 | MGYG000004899_3_144 | 223431 | 225914 | - | GH3 |
| TC | MGYG000004899_3 | MGYG000004899_3_145 | 226070 | 227209 | - | 1.B.14.6.1 |
| STP | MGYG000004899_3 | MGYG000004899_3_146 | 227206 | 227808 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | MGYG000004899_3 | MGYG000004899_3_147 | 227854 | 229746 | + | 1.A.13.2.3 |
| CAZyme | MGYG000004899_3 | MGYG000004899_3_148 | 229815 | 232025 | - | GH3 |
| pfam | MGYG000004899_3 | MGYG000004899_3_149 | 232246 | 233016 | - | BetaGal_ABD_1 | BetaGal_gal-bd |
| CAZyme | MGYG000004899_3 | MGYG000004899_3_150 | 233028 | 235748 | - | GH2 |
| CAZyme | MGYG000004899_3 | MGYG000004899_3_151 | 235745 | 237502 | - | GH2 |
| CAZyme | MGYG000004899_3 | MGYG000004899_3_152 | 237565 | 239556 | - | GH97 |
Gene ID: MGYG000004899_3_138
Type: CAZyme
Location: 211559 - 214111 (-)
Type: CAZyme
Location: 211559 - 214111 (-)
Gene ID: MGYG000004899_3_139
Type: TC
Location: 214225 - 215841 (-)
Type: TC
Location: 214225 - 215841 (-)
Gene ID: MGYG000004899_3_140
Type: TC
Location: 215861 - 219097 (-)
Type: TC
Location: 215861 - 219097 (-)
Gene ID: MGYG000004899_3_141
Type: STP
Location: 219239 - 220252 (-)
Type: STP
Location: 219239 - 220252 (-)
Gene ID: MGYG000004899_3_142
Type: TF
Location: 220411 - 220959 (+)
Type: TF
Location: 220411 - 220959 (+)
Gene ID: MGYG000004899_3_143
Type: CAZyme
Location: 221191 - 223413 (-)
Type: CAZyme
Location: 221191 - 223413 (-)
Gene ID: MGYG000004899_3_144
Type: CAZyme
Location: 223431 - 225914 (-)
Type: CAZyme
Location: 223431 - 225914 (-)
Gene ID: MGYG000004899_3_145
Type: TC
Location: 226070 - 227209 (-)
Type: TC
Location: 226070 - 227209 (-)
Gene ID: MGYG000004899_3_146
Type: STP
Location: 227206 - 227808 (-)
Type: STP
Location: 227206 - 227808 (-)
Gene ID: MGYG000004899_3_147
Type: TC
Location: 227854 - 229746 (+)
Type: TC
Location: 227854 - 229746 (+)
Gene ID: MGYG000004899_3_148
Type: CAZyme
Location: 229815 - 232025 (-)
Type: CAZyme
Location: 229815 - 232025 (-)
Gene ID: MGYG000004899_3_149
Type: pfam
Location: 232246 - 233016 (-)
Type: pfam
Location: 232246 - 233016 (-)
Gene ID: MGYG000004899_3_150
Type: CAZyme
Location: 233028 - 235748 (-)
Type: CAZyme
Location: 233028 - 235748 (-)
Gene ID: MGYG000004899_3_151
Type: CAZyme
Location: 235745 - 237502 (-)
Type: CAZyme
Location: 235745 - 237502 (-)
Gene ID: MGYG000004899_3_152
Type: CAZyme
Location: 237565 - 239556 (-)
Type: CAZyme
Location: 237565 - 239556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.