Cluster: MGYG000004899_CGC17
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000004899
- CGC Family ID: CGCFAM_01493
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004899_2 | MGYG000004899_2_164 | 236980 | 237753 | + | 3.A.1.15.12 |
| NULL(UNKNOWN) | MGYG000004899_2 | MGYG000004899_2_165 | 237811 | 239688 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_166 | 239725 | 243666 | - | GH43_16 | GH9 |
| pfam | MGYG000004899_2 | MGYG000004899_2_167 | 243672 | 244916 | - | GlcNAc_2-epim |
| pfam | MGYG000004899_2 | MGYG000004899_2_168 | 245144 | 246829 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004899_2 | MGYG000004899_2_169 | 246855 | 250028 | - | 1.B.14.6.1 |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_170 | 250149 | 252524 | - | GH31_3 |
| TF | MGYG000004899_2 | MGYG000004899_2_171 | 253012 | 256965 | + | HTH_AraC | HTH_AraC |
| pfam | MGYG000004899_2 | MGYG000004899_2_172 | 257060 | 258052 | + | PDDEXK_2 |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_173 | 258208 | 260148 | - | GH30 |
| pfam | MGYG000004899_2 | MGYG000004899_2_174 | 260164 | 261417 | - | GlcNAc_2-epim |
| TF | MGYG000004899_2 | MGYG000004899_2_175 | 261629 | 265612 | + | HTH_AraC |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_176 | 265730 | 268264 | + | GH9 |
| pfam | MGYG000004899_2 | MGYG000004899_2_177 | 268617 | 269426 | + | DUF1266 |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_178 | 269544 | 270968 | - | CE20 |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_179 | 271121 | 272845 | - | GH123 |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_180 | 272878 | 275025 | - | GH89 |
| CAZyme | MGYG000004899_2 | MGYG000004899_2_181 | 275116 | 276864 | - | GH9 |
Gene ID: MGYG000004899_2_164
Type: TC
Location: 236980 - 237753 (+)
Type: TC
Location: 236980 - 237753 (+)
Gene ID: MGYG000004899_2_165
Type:
Location: 237811 - 239688 (-)
Type:
Location: 237811 - 239688 (-)
Gene ID: MGYG000004899_2_166
Type: CAZyme
Location: 239725 - 243666 (-)
Type: CAZyme
Location: 239725 - 243666 (-)
Gene ID: MGYG000004899_2_167
Type: pfam
Location: 243672 - 244916 (-)
Type: pfam
Location: 243672 - 244916 (-)
Gene ID: MGYG000004899_2_168
Type: pfam
Location: 245144 - 246829 (-)
Type: pfam
Location: 245144 - 246829 (-)
Gene ID: MGYG000004899_2_169
Type: TC
Location: 246855 - 250028 (-)
Type: TC
Location: 246855 - 250028 (-)
Gene ID: MGYG000004899_2_170
Type: CAZyme
Location: 250149 - 252524 (-)
Type: CAZyme
Location: 250149 - 252524 (-)
Gene ID: MGYG000004899_2_171
Type: TF
Location: 253012 - 256965 (+)
Type: TF
Location: 253012 - 256965 (+)
Gene ID: MGYG000004899_2_172
Type: pfam
Location: 257060 - 258052 (+)
Type: pfam
Location: 257060 - 258052 (+)
Gene ID: MGYG000004899_2_173
Type: CAZyme
Location: 258208 - 260148 (-)
Type: CAZyme
Location: 258208 - 260148 (-)
Gene ID: MGYG000004899_2_174
Type: pfam
Location: 260164 - 261417 (-)
Type: pfam
Location: 260164 - 261417 (-)
Gene ID: MGYG000004899_2_175
Type: TF
Location: 261629 - 265612 (+)
Type: TF
Location: 261629 - 265612 (+)
Gene ID: MGYG000004899_2_176
Type: CAZyme
Location: 265730 - 268264 (+)
Type: CAZyme
Location: 265730 - 268264 (+)
Gene ID: MGYG000004899_2_177
Type: pfam
Location: 268617 - 269426 (+)
Type: pfam
Location: 268617 - 269426 (+)
Gene ID: MGYG000004899_2_178
Type: CAZyme
Location: 269544 - 270968 (-)
Type: CAZyme
Location: 269544 - 270968 (-)
Gene ID: MGYG000004899_2_179
Type: CAZyme
Location: 271121 - 272845 (-)
Type: CAZyme
Location: 271121 - 272845 (-)
Gene ID: MGYG000004899_2_180
Type: CAZyme
Location: 272878 - 275025 (-)
Type: CAZyme
Location: 272878 - 275025 (-)
Gene ID: MGYG000004899_2_181
Type: CAZyme
Location: 275116 - 276864 (-)
Type: CAZyme
Location: 275116 - 276864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900555635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.