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Cluster: MGYG000004884_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004884_2 MGYG000004884_2_7 8302 10275 + GH127
pfam MGYG000004884_2 MGYG000004884_2_8 10293 11747 + SBD_N | NBD_C
pfam MGYG000004884_2 MGYG000004884_2_9 11757 12566 + BKACE
TC MGYG000004884_2 MGYG000004884_2_10 12987 13739 + 8.A.3.2.3
NULL(UNKNOWN) MGYG000004884_2 MGYG000004884_2_11 13736 14113 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004884_2 MGYG000004884_2_12 14134 14868 + CpsB_CapC
TC MGYG000004884_2 MGYG000004884_2_13 14882 15562 + 8.A.3.2.3
pfam MGYG000004884_2 MGYG000004884_2_14 15797 16477 - Lipase_GDSL | Lipase_GDSL_2
CAZyme MGYG000004884_2 MGYG000004884_2_15 16493 17938 - GH29
CAZyme MGYG000004884_2 MGYG000004884_2_16 18031 19425 - CE20
STP MGYG000004884_2 MGYG000004884_2_17 19527 21194 - SBP_bac_1
TF MGYG000004884_2 MGYG000004884_2_18 21219 22001 - HTH_AraC | HTH_AraC
TC MGYG000004884_2 MGYG000004884_2_19 22251 24110 - 8.A.59.2.1
TC MGYG000004884_2 MGYG000004884_2_20 24314 25270 + 3.A.1.1.10
TC MGYG000004884_2 MGYG000004884_2_21 25286 26197 + 3.A.1.1.29
NULL(UNKNOWN) MGYG000004884_2 MGYG000004884_2_22 26297 28018 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000004884_2 MGYG000004884_2_23 28065 28199 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004884_2 MGYG000004884_2_24 28250 30919 + CBM67 | GH78
CAZyme MGYG000004884_2 MGYG000004884_2_25 31007 33703 + GH106
CAZyme MGYG000004884_2 MGYG000004884_2_26 33785 35533 + GH42
Gene ID: MGYG000004884_2_7
Type: CAZyme
Location: 8302 - 10275 (+)
Gene ID: MGYG000004884_2_8
Type: pfam
Location: 10293 - 11747 (+)
Gene ID: MGYG000004884_2_9
Type: pfam
Location: 11757 - 12566 (+)
Gene ID: MGYG000004884_2_10
Type: TC
Location: 12987 - 13739 (+)
Gene ID: MGYG000004884_2_11
Type:
Location: 13736 - 14113 (+)
Gene ID: MGYG000004884_2_12
Type: pfam
Location: 14134 - 14868 (+)
Gene ID: MGYG000004884_2_13
Type: TC
Location: 14882 - 15562 (+)
Gene ID: MGYG000004884_2_14
Type: pfam
Location: 15797 - 16477 (-)
Gene ID: MGYG000004884_2_15
Type: CAZyme
Location: 16493 - 17938 (-)
Gene ID: MGYG000004884_2_16
Type: CAZyme
Location: 18031 - 19425 (-)
Gene ID: MGYG000004884_2_17
Type: STP
Location: 19527 - 21194 (-)
Gene ID: MGYG000004884_2_18
Type: TF
Location: 21219 - 22001 (-)
Gene ID: MGYG000004884_2_19
Type: TC
Location: 22251 - 24110 (-)
Gene ID: MGYG000004884_2_20
Type: TC
Location: 24314 - 25270 (+)
Gene ID: MGYG000004884_2_21
Type: TC
Location: 25286 - 26197 (+)
Gene ID: MGYG000004884_2_22
Type:
Location: 26297 - 28018 (+)
Gene ID: MGYG000004884_2_23
Type:
Location: 28065 - 28199 (+)
Gene ID: MGYG000004884_2_24
Type: CAZyme
Location: 28250 - 30919 (+)
Gene ID: MGYG000004884_2_25
Type: CAZyme
Location: 31007 - 33703 (+)
Gene ID: MGYG000004884_2_26
Type: CAZyme
Location: 33785 - 35533 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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