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Cluster: MGYG000004880_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004880_11 MGYG000004880_11_36 47528 48301 - 1.B.44.1.2
STP MGYG000004880_11 MGYG000004880_11_37 48435 48605 + Fer4 | Fer4
STP MGYG000004880_11 MGYG000004880_11_38 48731 49081 - Response_reg
TC MGYG000004880_11 MGYG000004880_11_39 49118 50725 - 2.A.1.1.3
CAZyme MGYG000004880_11 MGYG000004880_11_40 50782 52761 + GH51_2
pfam MGYG000004880_11 MGYG000004880_11_41 53424 54383 + MTHFR
pfam MGYG000004880_11 MGYG000004880_11_42 54380 55528 + DNA_pol3_delta2
CAZyme MGYG000004880_11 MGYG000004880_11_43 55626 58472 + GH43_19 | GH43_29 | GH43_34
pfam MGYG000004880_11 MGYG000004880_11_44 58569 59873 + PSP1
pfam MGYG000004880_11 MGYG000004880_11_45 59860 60399 + GldH_lipo
TC MGYG000004880_11 MGYG000004880_11_46 60322 61791 - 2.A.103.1.2
Gene ID: MGYG000004880_11_36
Type: TC
Location: 47528 - 48301 (-)
Gene ID: MGYG000004880_11_37
Type: STP
Location: 48435 - 48605 (+)
Gene ID: MGYG000004880_11_38
Type: STP
Location: 48731 - 49081 (-)
Gene ID: MGYG000004880_11_39
Type: TC
Location: 49118 - 50725 (-)
Gene ID: MGYG000004880_11_40
Type: CAZyme
Location: 50782 - 52761 (+)
Gene ID: MGYG000004880_11_41
Type: pfam
Location: 53424 - 54383 (+)
Gene ID: MGYG000004880_11_42
Type: pfam
Location: 54380 - 55528 (+)
Gene ID: MGYG000004880_11_43
Type: CAZyme
Location: 55626 - 58472 (+)
Gene ID: MGYG000004880_11_44
Type: pfam
Location: 58569 - 59873 (+)
Gene ID: MGYG000004880_11_45
Type: pfam
Location: 59860 - 60399 (+)
Gene ID: MGYG000004880_11_46
Type: TC
Location: 60322 - 61791 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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