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Cluster: MGYG000004879_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004879_6 MGYG000004879_6_20 26490 27038 - 4.F.1.1.7
pfam MGYG000004879_6 MGYG000004879_6_21 27022 28359 - UPF0004 | Radical_SAM | TRAM_2
TC MGYG000004879_6 MGYG000004879_6_22 28679 30229 + 3.A.1.121.4
STP MGYG000004879_6 MGYG000004879_6_23 30448 31218 + Response_reg | Response_reg
STP MGYG000004879_6 MGYG000004879_6_24 31225 34146 + HATPase_c | HisKA | Response_reg
CAZyme MGYG000004879_6 MGYG000004879_6_25 34184 36577 - GH36
TC MGYG000004879_6 MGYG000004879_6_26 36570 37922 - 2.A.2.1.1
pfam MGYG000004879_6 MGYG000004879_6_27 37932 39398 - DUF6937 | DUF6938
CAZyme MGYG000004879_6 MGYG000004879_6_28 39448 41892 - GH2
Gene ID: MGYG000004879_6_20
Type: TC
Location: 26490 - 27038 (-)
Gene ID: MGYG000004879_6_21
Type: pfam
Location: 27022 - 28359 (-)
Gene ID: MGYG000004879_6_22
Type: TC
Location: 28679 - 30229 (+)
Gene ID: MGYG000004879_6_23
Type: STP
Location: 30448 - 31218 (+)
Gene ID: MGYG000004879_6_24
Type: STP
Location: 31225 - 34146 (+)
Gene ID: MGYG000004879_6_25
Type: CAZyme
Location: 34184 - 36577 (-)
Gene ID: MGYG000004879_6_26
Type: TC
Location: 36570 - 37922 (-)
Gene ID: MGYG000004879_6_27
Type: pfam
Location: 37932 - 39398 (-)
Gene ID: MGYG000004879_6_28
Type: CAZyme
Location: 39448 - 41892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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