Cluster: MGYG000004879_CGC4
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004879
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004879_3 | MGYG000004879_3_26 | 22005 | 23141 | + | GH105 |
| pfam | MGYG000004879_3 | MGYG000004879_3_27 | 23270 | 23605 | + | Cupin_2 |
| NULL(UNKNOWN) | MGYG000004879_3 | MGYG000004879_3_28 | 23636 | 24139 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004879_3 | MGYG000004879_3_29 | 24313 | 25584 | - | 2.A.49.9.2 |
| STP | MGYG000004879_3 | MGYG000004879_3_30 | 25577 | 26047 | - | CYTH |
| pfam | MGYG000004879_3 | MGYG000004879_3_31 | 26198 | 26473 | - | Bac_DNA_binding | HU-HIG |
| TC | MGYG000004879_3 | MGYG000004879_3_32 | 26578 | 28554 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | MGYG000004879_3 | MGYG000004879_3_33 | 28694 | 29455 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004879_3 | MGYG000004879_3_34 | 29469 | 30158 | - | 3.A.1.132.6 |
| TC | MGYG000004879_3 | MGYG000004879_3_35 | 30339 | 31982 | + | 3.A.18.1.1 |
Gene ID: MGYG000004879_3_26
Type: CAZyme
Location: 22005 - 23141 (+)
Type: CAZyme
Location: 22005 - 23141 (+)
Gene ID: MGYG000004879_3_27
Type: pfam
Location: 23270 - 23605 (+)
Type: pfam
Location: 23270 - 23605 (+)
Gene ID: MGYG000004879_3_28
Type:
Location: 23636 - 24139 (+)
Type:
Location: 23636 - 24139 (+)
Gene ID: MGYG000004879_3_29
Type: TC
Location: 24313 - 25584 (-)
Type: TC
Location: 24313 - 25584 (-)
Gene ID: MGYG000004879_3_30
Type: STP
Location: 25577 - 26047 (-)
Type: STP
Location: 25577 - 26047 (-)
Gene ID: MGYG000004879_3_31
Type: pfam
Location: 26198 - 26473 (-)
Type: pfam
Location: 26198 - 26473 (-)
Gene ID: MGYG000004879_3_32
Type: TC
Location: 26578 - 28554 (-)
Type: TC
Location: 26578 - 28554 (-)
Gene ID: MGYG000004879_3_33
Type:
Location: 28694 - 29455 (-)
Type:
Location: 28694 - 29455 (-)
Gene ID: MGYG000004879_3_34
Type: TC
Location: 29469 - 30158 (-)
Type: TC
Location: 29469 - 30158 (-)
Gene ID: MGYG000004879_3_35
Type: TC
Location: 30339 - 31982 (+)
Type: TC
Location: 30339 - 31982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_N
Species
Clostridium_N sp905215405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.