Cluster: MGYG000004879_CGC36
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004879
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004879_43 | MGYG000004879_43_9 | 6661 | 9048 | + | 9.A.8.1.6 |
| pfam | MGYG000004879_43 | MGYG000004879_43_10 | 9136 | 9273 | + | FeoB_associated |
| STP | MGYG000004879_43 | MGYG000004879_43_11 | 9744 | 11825 | + | cNMP_binding |
| TC | MGYG000004879_43 | MGYG000004879_43_12 | 12004 | 13386 | + | 2.A.66.1.28 |
| CAZyme | MGYG000004879_43 | MGYG000004879_43_13 | 13538 | 14611 | - | GT2 |
| TF | MGYG000004879_43 | MGYG000004879_43_14 | 14762 | 15670 | + | HTH_1 |
| TC | MGYG000004879_43 | MGYG000004879_43_15 | 15810 | 16376 | + | 2.A.51.1.6 |
| TC | MGYG000004879_43 | MGYG000004879_43_16 | 16373 | 16924 | + | 2.A.51.1.6 |
| TF | MGYG000004879_43 | MGYG000004879_43_17 | 17232 | 18089 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004879_43 | MGYG000004879_43_18 | 18309 | 20471 | + | GH3 |
| STP | MGYG000004879_43 | MGYG000004879_43_19 | 20547 | 22118 | + | SBP_bac_1 |
| TC | MGYG000004879_43 | MGYG000004879_43_20 | 22377 | 22850 | - | 9.A.24.1.7 |
Gene ID: MGYG000004879_43_9
Type: TC
Location: 6661 - 9048 (+)
Type: TC
Location: 6661 - 9048 (+)
Gene ID: MGYG000004879_43_10
Type: pfam
Location: 9136 - 9273 (+)
Type: pfam
Location: 9136 - 9273 (+)
Gene ID: MGYG000004879_43_11
Type: STP
Location: 9744 - 11825 (+)
Type: STP
Location: 9744 - 11825 (+)
Gene ID: MGYG000004879_43_12
Type: TC
Location: 12004 - 13386 (+)
Type: TC
Location: 12004 - 13386 (+)
Gene ID: MGYG000004879_43_13
Type: CAZyme
Location: 13538 - 14611 (-)
Type: CAZyme
Location: 13538 - 14611 (-)
Gene ID: MGYG000004879_43_14
Type: TF
Location: 14762 - 15670 (+)
Type: TF
Location: 14762 - 15670 (+)
Gene ID: MGYG000004879_43_15
Type: TC
Location: 15810 - 16376 (+)
Type: TC
Location: 15810 - 16376 (+)
Gene ID: MGYG000004879_43_16
Type: TC
Location: 16373 - 16924 (+)
Type: TC
Location: 16373 - 16924 (+)
Gene ID: MGYG000004879_43_17
Type: TF
Location: 17232 - 18089 (-)
Type: TF
Location: 17232 - 18089 (-)
Gene ID: MGYG000004879_43_18
Type: CAZyme
Location: 18309 - 20471 (+)
Type: CAZyme
Location: 18309 - 20471 (+)
Gene ID: MGYG000004879_43_19
Type: STP
Location: 20547 - 22118 (+)
Type: STP
Location: 20547 - 22118 (+)
Gene ID: MGYG000004879_43_20
Type: TC
Location: 22377 - 22850 (-)
Type: TC
Location: 22377 - 22850 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_N
Species
Clostridium_N sp905215405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.