Cluster: MGYG000004879_CGC10
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004879
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004879_8 | MGYG000004879_8_21 | 20372 | 21799 | - | 9.B.18.1.2 |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_22 | 22260 | 23972 | - | GH25 |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_23 | 24097 | 25938 | - | GT2 |
| pfam | MGYG000004879_8 | MGYG000004879_8_24 | 26007 | 26921 | - | Glycos_transf_2 |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_25 | 26932 | 28134 | - | GT4 |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_26 | 28173 | 29348 | - | GT4 |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_27 | 29345 | 30448 | - | GT2 |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_28 | 30653 | 31393 | - | GT2 |
| NULL(UNKNOWN) | MGYG000004879_8 | MGYG000004879_8_29 | 31440 | 33509 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004879_8 | MGYG000004879_8_30 | 34382 | 35584 | + | GT2 |
Gene ID: MGYG000004879_8_21
Type: TC
Location: 20372 - 21799 (-)
Type: TC
Location: 20372 - 21799 (-)
Gene ID: MGYG000004879_8_22
Type: CAZyme
Location: 22260 - 23972 (-)
Type: CAZyme
Location: 22260 - 23972 (-)
Gene ID: MGYG000004879_8_23
Type: CAZyme
Location: 24097 - 25938 (-)
Type: CAZyme
Location: 24097 - 25938 (-)
Gene ID: MGYG000004879_8_24
Type: pfam
Location: 26007 - 26921 (-)
Type: pfam
Location: 26007 - 26921 (-)
Gene ID: MGYG000004879_8_25
Type: CAZyme
Location: 26932 - 28134 (-)
Type: CAZyme
Location: 26932 - 28134 (-)
Gene ID: MGYG000004879_8_26
Type: CAZyme
Location: 28173 - 29348 (-)
Type: CAZyme
Location: 28173 - 29348 (-)
Gene ID: MGYG000004879_8_27
Type: CAZyme
Location: 29345 - 30448 (-)
Type: CAZyme
Location: 29345 - 30448 (-)
Gene ID: MGYG000004879_8_28
Type: CAZyme
Location: 30653 - 31393 (-)
Type: CAZyme
Location: 30653 - 31393 (-)
Gene ID: MGYG000004879_8_29
Type:
Location: 31440 - 33509 (-)
Type:
Location: 31440 - 33509 (-)
Gene ID: MGYG000004879_8_30
Type: CAZyme
Location: 34382 - 35584 (+)
Type: CAZyme
Location: 34382 - 35584 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_N
Species
Clostridium_N sp905215405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.