Cluster: MGYG000004877_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004877
- CGC Family ID: CGCFAM_10001
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004877_5 | MGYG000004877_5_12 | 14884 | 16563 | + | 3.A.1.120.6 |
| CAZyme | MGYG000004877_5 | MGYG000004877_5_13 | 16615 | 17712 | - | GH25 |
| pfam | MGYG000004877_5 | MGYG000004877_5_14 | 17867 | 18985 | + | Aldo_ket_red | Fer4_9 | Fer4_17 |
| CAZyme | MGYG000004877_5 | MGYG000004877_5_15 | 19064 | 20086 | - | GH25 |
| pfam | MGYG000004877_5 | MGYG000004877_5_16 | 20425 | 20838 | - | Pep_deformylase |
| CAZyme | MGYG000004877_5 | MGYG000004877_5_17 | 21054 | 22097 | + | GH5_44 |
Gene ID: MGYG000004877_5_12
Type: TC
Location: 14884 - 16563 (+)
Type: TC
Location: 14884 - 16563 (+)
Gene ID: MGYG000004877_5_13
Type: CAZyme
Location: 16615 - 17712 (-)
Type: CAZyme
Location: 16615 - 17712 (-)
Gene ID: MGYG000004877_5_14
Type: pfam
Location: 17867 - 18985 (+)
Type: pfam
Location: 17867 - 18985 (+)
Gene ID: MGYG000004877_5_15
Type: CAZyme
Location: 19064 - 20086 (-)
Type: CAZyme
Location: 19064 - 20086 (-)
Gene ID: MGYG000004877_5_16
Type: pfam
Location: 20425 - 20838 (-)
Type: pfam
Location: 20425 - 20838 (-)
Gene ID: MGYG000004877_5_17
Type: CAZyme
Location: 21054 - 22097 (+)
Type: CAZyme
Location: 21054 - 22097 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella_H
Species
Olsenella_H porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.