Cluster: MGYG000004877_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004877
- CGC Family ID: CGCFAM_01168
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004877_5 | MGYG000004877_5_2 | 810 | 3080 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | MGYG000004877_5 | MGYG000004877_5_3 | 3264 | 3386 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004877_5 | MGYG000004877_5_4 | 3467 | 4882 | - | GntR |
| CAZyme | MGYG000004877_5 | MGYG000004877_5_5 | 4848 | 7994 | - | GH59 |
Gene ID: MGYG000004877_5_2
Type: TC
Location: 810 - 3080 (-)
Type: TC
Location: 810 - 3080 (-)
Gene ID: MGYG000004877_5_3
Type:
Location: 3264 - 3386 (+)
Type:
Location: 3264 - 3386 (+)
Gene ID: MGYG000004877_5_4
Type: TF
Location: 3467 - 4882 (-)
Type: TF
Location: 3467 - 4882 (-)
Gene ID: MGYG000004877_5_5
Type: CAZyme
Location: 4848 - 7994 (-)
Type: CAZyme
Location: 4848 - 7994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella_H
Species
Olsenella_H porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004877_5_2 | vegan > omnivore | 2.76504 | 0.00483 |
| MGYG000004877_5_2 | vegetarian > omnivore | 1.88104 | 0.04443 |
| MGYG000004877_5_3 | vegan > omnivore | 1.99433 | 0.00483 |
| MGYG000004877_5_3 | vegetarian > omnivore | 1.12210 | 0.04443 |
| MGYG000004877_5_4 | vegan > omnivore | 5.69451 | 0.00483 |
| MGYG000004877_5_4 | vegetarian > omnivore | 4.97354 | 0.04443 |
| MGYG000004877_5_5 | vegan > omnivore | 3.48158 | 0.00483 |
| MGYG000004877_5_5 | vegetarian > omnivore | 2.75279 | 0.04443 |