Cluster: MGYG000004877_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004877
- CGC Family ID: CGCFAM_00272
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004877_33 | MGYG000004877_33_11 | 9198 | 9788 | + | GH23 |
| pfam | MGYG000004877_33 | MGYG000004877_33_12 | 9923 | 12220 | + | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| TC | MGYG000004877_33 | MGYG000004877_33_13 | 12407 | 12688 | + | 4.A.5.1.6 |
| STP | MGYG000004877_33 | MGYG000004877_33_14 | 12830 | 14491 | - | Pyr_redox_2 |
| pfam | MGYG000004877_33 | MGYG000004877_33_15 | 14493 | 15779 | - | FAD_binding_2 | HI0933_like | FAD_oxidored | NAD_binding_8 |
| TC | MGYG000004877_33 | MGYG000004877_33_16 | 15776 | 16642 | - | 3.A.1.132.3 |
Gene ID: MGYG000004877_33_11
Type: CAZyme
Location: 9198 - 9788 (+)
Type: CAZyme
Location: 9198 - 9788 (+)
Gene ID: MGYG000004877_33_12
Type: pfam
Location: 9923 - 12220 (+)
Type: pfam
Location: 9923 - 12220 (+)
Gene ID: MGYG000004877_33_13
Type: TC
Location: 12407 - 12688 (+)
Type: TC
Location: 12407 - 12688 (+)
Gene ID: MGYG000004877_33_14
Type: STP
Location: 12830 - 14491 (-)
Type: STP
Location: 12830 - 14491 (-)
Gene ID: MGYG000004877_33_15
Type: pfam
Location: 14493 - 15779 (-)
Type: pfam
Location: 14493 - 15779 (-)
Gene ID: MGYG000004877_33_16
Type: TC
Location: 15776 - 16642 (-)
Type: TC
Location: 15776 - 16642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella_H
Species
Olsenella_H porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.