Cluster: MGYG000004872_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: MGYG000004872
- CGC Family ID: CGCFAM_00012
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004872_14 | MGYG000004872_14_89 | 86947 | 87933 | + | 8.A.5.1.6 |
| TC | MGYG000004872_14 | MGYG000004872_14_90 | 88142 | 89440 | + | 4.A.3.2.8 |
| CAZyme | MGYG000004872_14 | MGYG000004872_14_91 | 89424 | 90836 | + | GH1 |
| pfam | MGYG000004872_14 | MGYG000004872_14_92 | 90833 | 91708 | + | ROK |
| TF | MGYG000004872_14 | MGYG000004872_14_93 | 91729 | 92922 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004872_14 | MGYG000004872_14_94 | 92999 | 94456 | + | GH1 |
Gene ID: MGYG000004872_14_89
Type: TC
Location: 86947 - 87933 (+)
Type: TC
Location: 86947 - 87933 (+)
Gene ID: MGYG000004872_14_90
Type: TC
Location: 88142 - 89440 (+)
Type: TC
Location: 88142 - 89440 (+)
Gene ID: MGYG000004872_14_91
Type: CAZyme
Location: 89424 - 90836 (+)
Type: CAZyme
Location: 89424 - 90836 (+)
Gene ID: MGYG000004872_14_92
Type: pfam
Location: 90833 - 91708 (+)
Type: pfam
Location: 90833 - 91708 (+)
Gene ID: MGYG000004872_14_93
Type: TF
Location: 91729 - 92922 (-)
Type: TF
Location: 91729 - 92922 (-)
Gene ID: MGYG000004872_14_94
Type: CAZyme
Location: 92999 - 94456 (+)
Type: CAZyme
Location: 92999 - 94456 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Stoquefichus
Species
Stoquefichus sp001244545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.