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Cluster: MGYG000004872_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004872_13 MGYG000004872_13_85 87405 88088 + 3.A.2.1.5
TC MGYG000004872_13 MGYG000004872_13_86 88135 88377 + 3.A.2.1.5
pfam MGYG000004872_13 MGYG000004872_13_87 88415 88918 + ATP-synt_B
pfam MGYG000004872_13 MGYG000004872_13_88 88918 89448 + OSCP
TC MGYG000004872_13 MGYG000004872_13_89 89458 90981 + 3.A.2.1.5
TC MGYG000004872_13 MGYG000004872_13_90 90987 91838 + 3.A.2.1.5
TC MGYG000004872_13 MGYG000004872_13_91 91852 93258 + 3.A.2.1.5
TC MGYG000004872_13 MGYG000004872_13_92 93245 93643 + 3.A.2.1.5
pfam MGYG000004872_13 MGYG000004872_13_93 93747 94475 + Amidase_3
CAZyme MGYG000004872_13 MGYG000004872_13_94 94703 96118 + CE4
TF MGYG000004872_13 MGYG000004872_13_95 96140 97591 - GntR | GntR
STP MGYG000004872_13 MGYG000004872_13_96 97740 99947 + EAL | GGDEF | dCache_1
TC MGYG000004872_13 MGYG000004872_13_97 99998 100300 - 4.A.3.2.8
Gene ID: MGYG000004872_13_85
Type: TC
Location: 87405 - 88088 (+)
Gene ID: MGYG000004872_13_86
Type: TC
Location: 88135 - 88377 (+)
Gene ID: MGYG000004872_13_87
Type: pfam
Location: 88415 - 88918 (+)
Gene ID: MGYG000004872_13_88
Type: pfam
Location: 88918 - 89448 (+)
Gene ID: MGYG000004872_13_89
Type: TC
Location: 89458 - 90981 (+)
Gene ID: MGYG000004872_13_90
Type: TC
Location: 90987 - 91838 (+)
Gene ID: MGYG000004872_13_91
Type: TC
Location: 91852 - 93258 (+)
Gene ID: MGYG000004872_13_92
Type: TC
Location: 93245 - 93643 (+)
Gene ID: MGYG000004872_13_93
Type: pfam
Location: 93747 - 94475 (+)
Gene ID: MGYG000004872_13_94
Type: CAZyme
Location: 94703 - 96118 (+)
Gene ID: MGYG000004872_13_95
Type: TF
Location: 96140 - 97591 (-)
Gene ID: MGYG000004872_13_96
Type: STP
Location: 97740 - 99947 (+)
Gene ID: MGYG000004872_13_97
Type: TC
Location: 99998 - 100300 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004872_13_91 vegan > omnivore 1.96618 0.02248
MGYG000004872_13_91 vegetarian > omnivore 1.31479 0.03101

🧭 Explore Read Mapping of CGC

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