Cluster: MGYG000004872_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004872
- CGC Family ID: CGCFAM_06413
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004872_1 | MGYG000004872_1_219 | 232083 | 233087 | - | 2.A.119.1.3 |
| TF | MGYG000004872_1 | MGYG000004872_1_220 | 233159 | 233440 | - | HTH_5 |
| CAZyme | MGYG000004872_1 | MGYG000004872_1_221 | 233510 | 234964 | - | GH1 |
| TF | MGYG000004872_1 | MGYG000004872_1_222 | 235093 | 235977 | - | HTH_6 |
| CAZyme | MGYG000004872_1 | MGYG000004872_1_223 | 236188 | 237456 | - | GH1 |
| TC | MGYG000004872_1 | MGYG000004872_1_224 | 237449 | 238750 | - | 4.A.3.2.2 |
| CAZyme | MGYG000004872_1 | MGYG000004872_1_225 | 238750 | 240144 | - | GH1 |
Gene ID: MGYG000004872_1_219
Type: TC
Location: 232083 - 233087 (-)
Type: TC
Location: 232083 - 233087 (-)
Gene ID: MGYG000004872_1_220
Type: TF
Location: 233159 - 233440 (-)
Type: TF
Location: 233159 - 233440 (-)
Gene ID: MGYG000004872_1_221
Type: CAZyme
Location: 233510 - 234964 (-)
Type: CAZyme
Location: 233510 - 234964 (-)
Gene ID: MGYG000004872_1_222
Type: TF
Location: 235093 - 235977 (-)
Type: TF
Location: 235093 - 235977 (-)
Gene ID: MGYG000004872_1_223
Type: CAZyme
Location: 236188 - 237456 (-)
Type: CAZyme
Location: 236188 - 237456 (-)
Gene ID: MGYG000004872_1_224
Type: TC
Location: 237449 - 238750 (-)
Type: TC
Location: 237449 - 238750 (-)
Gene ID: MGYG000004872_1_225
Type: CAZyme
Location: 238750 - 240144 (-)
Type: CAZyme
Location: 238750 - 240144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Stoquefichus
Species
Stoquefichus sp001244545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.