Cluster: MGYG000004872_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004872
- CGC Family ID: CGCFAM_08015
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004872_12 | MGYG000004872_12_32 | 28726 | 30144 | + | GH1 |
| TF | MGYG000004872_12 | MGYG000004872_12_33 | 30272 | 31309 | - | LacI |
| CAZyme | MGYG000004872_12 | MGYG000004872_12_34 | 31521 | 32933 | + | GH1 |
| pfam | MGYG000004872_12 | MGYG000004872_12_35 | 32999 | 33649 | + | Ribul_P_3_epim |
| TC | MGYG000004872_12 | MGYG000004872_12_36 | 33663 | 33962 | + | 4.A.3.2.8 |
Gene ID: MGYG000004872_12_32
Type: CAZyme
Location: 28726 - 30144 (+)
Type: CAZyme
Location: 28726 - 30144 (+)
Gene ID: MGYG000004872_12_33
Type: TF
Location: 30272 - 31309 (-)
Type: TF
Location: 30272 - 31309 (-)
Gene ID: MGYG000004872_12_34
Type: CAZyme
Location: 31521 - 32933 (+)
Type: CAZyme
Location: 31521 - 32933 (+)
Gene ID: MGYG000004872_12_35
Type: pfam
Location: 32999 - 33649 (+)
Type: pfam
Location: 32999 - 33649 (+)
Gene ID: MGYG000004872_12_36
Type: TC
Location: 33663 - 33962 (+)
Type: TC
Location: 33663 - 33962 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Stoquefichus
Species
Stoquefichus sp001244545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.