Cluster: MGYG000004872_CGC26
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004872
- CGC Family ID: CGCFAM_06074
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004872_8 | MGYG000004872_8_127 | 133465 | 134127 | + | 9.B.143.2.3 |
| NULL(UNKNOWN) | MGYG000004872_8 | MGYG000004872_8_128 | 134141 | 134494 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004872_8 | MGYG000004872_8_129 | 134535 | 135167 | + | DUF421 |
| TC | MGYG000004872_8 | MGYG000004872_8_130 | 135179 | 135973 | - | 3.A.1.34.1 |
| TC | MGYG000004872_8 | MGYG000004872_8_131 | 135966 | 136892 | - | 3.A.1.34.1 |
| TC | MGYG000004872_8 | MGYG000004872_8_132 | 136902 | 137885 | - | 3.A.1.34.1 |
| TC | MGYG000004872_8 | MGYG000004872_8_133 | 138297 | 139085 | - | 2.A.5.5.2 |
| TC | MGYG000004872_8 | MGYG000004872_8_134 | 139128 | 140726 | - | 2.A.36.6.4 |
| NULL(UNKNOWN) | MGYG000004872_8 | MGYG000004872_8_135 | 140809 | 142056 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004872_8 | MGYG000004872_8_136 | 142139 | 143125 | - | HTH_AraC |
| TC | MGYG000004872_8 | MGYG000004872_8_137 | 143196 | 144638 | + | 4.A.3.2.2 |
| CAZyme | MGYG000004872_8 | MGYG000004872_8_138 | 144680 | 146926 | + | GH78 |
Gene ID: MGYG000004872_8_127
Type: TC
Location: 133465 - 134127 (+)
Type: TC
Location: 133465 - 134127 (+)
Gene ID: MGYG000004872_8_128
Type:
Location: 134141 - 134494 (-)
Type:
Location: 134141 - 134494 (-)
Gene ID: MGYG000004872_8_129
Type: pfam
Location: 134535 - 135167 (+)
Type: pfam
Location: 134535 - 135167 (+)
Gene ID: MGYG000004872_8_130
Type: TC
Location: 135179 - 135973 (-)
Type: TC
Location: 135179 - 135973 (-)
Gene ID: MGYG000004872_8_131
Type: TC
Location: 135966 - 136892 (-)
Type: TC
Location: 135966 - 136892 (-)
Gene ID: MGYG000004872_8_132
Type: TC
Location: 136902 - 137885 (-)
Type: TC
Location: 136902 - 137885 (-)
Gene ID: MGYG000004872_8_133
Type: TC
Location: 138297 - 139085 (-)
Type: TC
Location: 138297 - 139085 (-)
Gene ID: MGYG000004872_8_134
Type: TC
Location: 139128 - 140726 (-)
Type: TC
Location: 139128 - 140726 (-)
Gene ID: MGYG000004872_8_135
Type:
Location: 140809 - 142056 (-)
Type:
Location: 140809 - 142056 (-)
Gene ID: MGYG000004872_8_136
Type: TF
Location: 142139 - 143125 (-)
Type: TF
Location: 142139 - 143125 (-)
Gene ID: MGYG000004872_8_137
Type: TC
Location: 143196 - 144638 (+)
Type: TC
Location: 143196 - 144638 (+)
Gene ID: MGYG000004872_8_138
Type: CAZyme
Location: 144680 - 146926 (+)
Type: CAZyme
Location: 144680 - 146926 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Stoquefichus
Species
Stoquefichus sp001244545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.