Cluster: MGYG000004872_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: MGYG000004872
- CGC Family ID: CGCFAM_00012
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004872_6 | MGYG000004872_6_2 | 1205 | 2503 | - | 4.A.3.2.2 |
| pfam | MGYG000004872_6 | MGYG000004872_6_3 | 2503 | 3078 | - | RDD |
| CAZyme | MGYG000004872_6 | MGYG000004872_6_4 | 3056 | 4462 | - | GH1 |
| TF | MGYG000004872_6 | MGYG000004872_6_5 | 4585 | 5472 | - | HTH_6 |
| pfam | MGYG000004872_6 | MGYG000004872_6_6 | 5496 | 6344 | - | DUF2262 | DUF7021 |
| CAZyme | MGYG000004872_6 | MGYG000004872_6_7 | 6479 | 7927 | - | GH1 |
Gene ID: MGYG000004872_6_2
Type: TC
Location: 1205 - 2503 (-)
Type: TC
Location: 1205 - 2503 (-)
Gene ID: MGYG000004872_6_3
Type: pfam
Location: 2503 - 3078 (-)
Type: pfam
Location: 2503 - 3078 (-)
Gene ID: MGYG000004872_6_4
Type: CAZyme
Location: 3056 - 4462 (-)
Type: CAZyme
Location: 3056 - 4462 (-)
Gene ID: MGYG000004872_6_5
Type: TF
Location: 4585 - 5472 (-)
Type: TF
Location: 4585 - 5472 (-)
Gene ID: MGYG000004872_6_6
Type: pfam
Location: 5496 - 6344 (-)
Type: pfam
Location: 5496 - 6344 (-)
Gene ID: MGYG000004872_6_7
Type: CAZyme
Location: 6479 - 7927 (-)
Type: CAZyme
Location: 6479 - 7927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Stoquefichus
Species
Stoquefichus sp001244545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004872_6_7 | vegan > omnivore | 2.98895 | 0.02248 |