Cluster: MGYG000004872_CGC1
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004872
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004872_1 | MGYG000004872_1_74 | 74705 | 75646 | - | 2.A.19.5.2 |
| STP | MGYG000004872_1 | MGYG000004872_1_75 | 75869 | 76270 | + | NUDIX |
| TF | MGYG000004872_1 | MGYG000004872_1_76 | 76267 | 76932 | + | Trans_reg_C |
| TC | MGYG000004872_1 | MGYG000004872_1_77 | 77023 | 77937 | + | 3.A.1.131.1 |
| NULL(UNKNOWN) | MGYG000004872_1 | MGYG000004872_1_78 | 77930 | 78673 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000004872_1 | MGYG000004872_1_79 | 78689 | 79588 | + | HATPase_c | HisKA |
| TC | MGYG000004872_1 | MGYG000004872_1_80 | 80326 | 81612 | - | 2.A.26.1.1 |
| pfam | MGYG000004872_1 | MGYG000004872_1_81 | 81662 | 82591 | - | Mem_trans | Mem_trans |
| CAZyme | MGYG000004872_1 | MGYG000004872_1_82 | 82695 | 84164 | - | GH1 |
| TF | MGYG000004872_1 | MGYG000004872_1_83 | 84284 | 85144 | - | HTH_6 |
| NULL(UNKNOWN) | MGYG000004872_1 | MGYG000004872_1_84 | 85234 | 85506 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004872_1 | MGYG000004872_1_85 | 85521 | 86861 | - | 4.A.3.2.9 |
| NULL(UNKNOWN) | MGYG000004872_1 | MGYG000004872_1_86 | 87037 | 87810 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004872_1 | MGYG000004872_1_87 | 87912 | 89348 | - | 3.A.18.1.1 |
Gene ID: MGYG000004872_1_74
Type: TC
Location: 74705 - 75646 (-)
Type: TC
Location: 74705 - 75646 (-)
Gene ID: MGYG000004872_1_75
Type: STP
Location: 75869 - 76270 (+)
Type: STP
Location: 75869 - 76270 (+)
Gene ID: MGYG000004872_1_76
Type: TF
Location: 76267 - 76932 (+)
Type: TF
Location: 76267 - 76932 (+)
Gene ID: MGYG000004872_1_77
Type: TC
Location: 77023 - 77937 (+)
Type: TC
Location: 77023 - 77937 (+)
Gene ID: MGYG000004872_1_78
Type:
Location: 77930 - 78673 (+)
Type:
Location: 77930 - 78673 (+)
Gene ID: MGYG000004872_1_79
Type: STP
Location: 78689 - 79588 (+)
Type: STP
Location: 78689 - 79588 (+)
Gene ID: MGYG000004872_1_80
Type: TC
Location: 80326 - 81612 (-)
Type: TC
Location: 80326 - 81612 (-)
Gene ID: MGYG000004872_1_81
Type: pfam
Location: 81662 - 82591 (-)
Type: pfam
Location: 81662 - 82591 (-)
Gene ID: MGYG000004872_1_82
Type: CAZyme
Location: 82695 - 84164 (-)
Type: CAZyme
Location: 82695 - 84164 (-)
Gene ID: MGYG000004872_1_83
Type: TF
Location: 84284 - 85144 (-)
Type: TF
Location: 84284 - 85144 (-)
Gene ID: MGYG000004872_1_84
Type:
Location: 85234 - 85506 (-)
Type:
Location: 85234 - 85506 (-)
Gene ID: MGYG000004872_1_85
Type: TC
Location: 85521 - 86861 (-)
Type: TC
Location: 85521 - 86861 (-)
Gene ID: MGYG000004872_1_86
Type:
Location: 87037 - 87810 (-)
Type:
Location: 87037 - 87810 (-)
Gene ID: MGYG000004872_1_87
Type: TC
Location: 87912 - 89348 (-)
Type: TC
Location: 87912 - 89348 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Stoquefichus
Species
Stoquefichus sp001244545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.