Cluster: MGYG000004862_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004862
- CGC Family ID: CGCFAM_08037
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004862_7 | MGYG000004862_7_21 | 20259 | 21212 | + | GT2 |
| CAZyme | MGYG000004862_7 | MGYG000004862_7_22 | 21217 | 22299 | + | GT4 |
| CAZyme | MGYG000004862_7 | MGYG000004862_7_23 | 22292 | 23191 | + | GT2 |
| TC | MGYG000004862_7 | MGYG000004862_7_24 | 23281 | 24084 | + | 3.A.1.103.6 |
| TC | MGYG000004862_7 | MGYG000004862_7_25 | 24097 | 24831 | + | 3.A.1.103.1 |
| CAZyme | MGYG000004862_7 | MGYG000004862_7_26 | 24831 | 25922 | + | GT2 |
| CAZyme | MGYG000004862_7 | MGYG000004862_7_27 | 25915 | 26667 | + | GT32 |
| pfam | MGYG000004862_7 | MGYG000004862_7_28 | 26781 | 28565 | + | DUF6020 |
| CAZyme | MGYG000004862_7 | MGYG000004862_7_29 | 28768 | 29703 | + | GT2 |
| pfam | MGYG000004862_7 | MGYG000004862_7_30 | 29696 | 30088 | + | GtrA_DPMS_TM |
| CAZyme | MGYG000004862_7 | MGYG000004862_7_31 | 30093 | 31217 | + | GT4 |
Gene ID: MGYG000004862_7_21
Type: CAZyme
Location: 20259 - 21212 (+)
Type: CAZyme
Location: 20259 - 21212 (+)
Gene ID: MGYG000004862_7_22
Type: CAZyme
Location: 21217 - 22299 (+)
Type: CAZyme
Location: 21217 - 22299 (+)
Gene ID: MGYG000004862_7_23
Type: CAZyme
Location: 22292 - 23191 (+)
Type: CAZyme
Location: 22292 - 23191 (+)
Gene ID: MGYG000004862_7_24
Type: TC
Location: 23281 - 24084 (+)
Type: TC
Location: 23281 - 24084 (+)
Gene ID: MGYG000004862_7_25
Type: TC
Location: 24097 - 24831 (+)
Type: TC
Location: 24097 - 24831 (+)
Gene ID: MGYG000004862_7_26
Type: CAZyme
Location: 24831 - 25922 (+)
Type: CAZyme
Location: 24831 - 25922 (+)
Gene ID: MGYG000004862_7_27
Type: CAZyme
Location: 25915 - 26667 (+)
Type: CAZyme
Location: 25915 - 26667 (+)
Gene ID: MGYG000004862_7_28
Type: pfam
Location: 26781 - 28565 (+)
Type: pfam
Location: 26781 - 28565 (+)
Gene ID: MGYG000004862_7_29
Type: CAZyme
Location: 28768 - 29703 (+)
Type: CAZyme
Location: 28768 - 29703 (+)
Gene ID: MGYG000004862_7_30
Type: pfam
Location: 29696 - 30088 (+)
Type: pfam
Location: 29696 - 30088 (+)
Gene ID: MGYG000004862_7_31
Type: CAZyme
Location: 30093 - 31217 (+)
Type: CAZyme
Location: 30093 - 31217 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-762
Species
CAG-762 sp900551315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.