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Cluster: MGYG000004860_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004860_2 MGYG000004860_2_160 171335 172084 - 3.A.1.34.1
TC MGYG000004860_2 MGYG000004860_2_161 172035 173000 - 3.A.1.34.1
TC MGYG000004860_2 MGYG000004860_2_162 173034 173996 - 3.A.1.34.1
pfam MGYG000004860_2 MGYG000004860_2_163 174402 175298 - DegV
TC MGYG000004860_2 MGYG000004860_2_164 175711 176706 + 3.A.1.34.1
TC MGYG000004860_2 MGYG000004860_2_165 176703 177602 + 3.A.1.34.1
TC MGYG000004860_2 MGYG000004860_2_166 177595 178365 + 3.A.1.34.1
pfam MGYG000004860_2 MGYG000004860_2_167 178445 179320 - 3HCDH_N | NAD_binding_2 | F420_oxidored | NAD_binding_11
TC MGYG000004860_2 MGYG000004860_2_168 179426 180196 - 2.A.109.1.3
peptidase MGYG000004860_2 MGYG000004860_2_169 180389 181711 + S12.A21
CAZyme MGYG000004860_2 MGYG000004860_2_170 182197 182820 - GH73
Gene ID: MGYG000004860_2_160
Type: TC
Location: 171335 - 172084 (-)
Gene ID: MGYG000004860_2_161
Type: TC
Location: 172035 - 173000 (-)
Gene ID: MGYG000004860_2_162
Type: TC
Location: 173034 - 173996 (-)
Gene ID: MGYG000004860_2_163
Type: pfam
Location: 174402 - 175298 (-)
Gene ID: MGYG000004860_2_164
Type: TC
Location: 175711 - 176706 (+)
Gene ID: MGYG000004860_2_165
Type: TC
Location: 176703 - 177602 (+)
Gene ID: MGYG000004860_2_166
Type: TC
Location: 177595 - 178365 (+)
Gene ID: MGYG000004860_2_167
Type: pfam
Location: 178445 - 179320 (-)
Gene ID: MGYG000004860_2_168
Type: TC
Location: 179426 - 180196 (-)
Gene ID: MGYG000004860_2_169
Type: peptidase
Location: 180389 - 181711 (+)
Gene ID: MGYG000004860_2_170
Type: CAZyme
Location: 182197 - 182820 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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