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Cluster: MGYG000004860_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004860_20 MGYG000004860_20_3 1935 3320 + 9.A.40.2.1
TF MGYG000004860_20 MGYG000004860_20_4 3476 3745 - HTH_3
TC MGYG000004860_20 MGYG000004860_20_5 3933 5375 - 2.A.1.3.30
TC MGYG000004860_20 MGYG000004860_20_6 5465 6985 - 3.A.1.121.5
pfam MGYG000004860_20 MGYG000004860_20_7 7321 7782 + Flavodoxin_NdrI
STP MGYG000004860_20 MGYG000004860_20_8 7775 8524 + Nitroreductase
TC MGYG000004860_20 MGYG000004860_20_9 9178 10350 - 2.A.1.2.69
STP MGYG000004860_20 MGYG000004860_20_10 10582 10809 + HMA
pfam MGYG000004860_20 MGYG000004860_20_11 10841 11398 + Ferritin
CAZyme MGYG000004860_20 MGYG000004860_20_12 11702 13804 - GH36
TF MGYG000004860_20 MGYG000004860_20_13 14036 15004 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) MGYG000004860_20 MGYG000004860_20_14 15001 15198 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004860_20 MGYG000004860_20_15 15282 16667 - 2.A.2.3.3
CAZyme MGYG000004860_20 MGYG000004860_20_16 16704 17975 - GH27
NULL(UNKNOWN) MGYG000004860_20 MGYG000004860_20_17 18369 18665 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004860_20 MGYG000004860_20_18 19016 20917 + 3.A.3.6.16
CAZyme MGYG000004860_20 MGYG000004860_20_19 21139 22128 + GT8
Gene ID: MGYG000004860_20_3
Type: TC
Location: 1935 - 3320 (+)
Gene ID: MGYG000004860_20_4
Type: TF
Location: 3476 - 3745 (-)
Gene ID: MGYG000004860_20_5
Type: TC
Location: 3933 - 5375 (-)
Gene ID: MGYG000004860_20_6
Type: TC
Location: 5465 - 6985 (-)
Gene ID: MGYG000004860_20_7
Type: pfam
Location: 7321 - 7782 (+)
Gene ID: MGYG000004860_20_8
Type: STP
Location: 7775 - 8524 (+)
Gene ID: MGYG000004860_20_9
Type: TC
Location: 9178 - 10350 (-)
Gene ID: MGYG000004860_20_10
Type: STP
Location: 10582 - 10809 (+)
Gene ID: MGYG000004860_20_11
Type: pfam
Location: 10841 - 11398 (+)
Gene ID: MGYG000004860_20_12
Type: CAZyme
Location: 11702 - 13804 (-)
Gene ID: MGYG000004860_20_13
Type: TF
Location: 14036 - 15004 (+)
Gene ID: MGYG000004860_20_14
Type:
Location: 15001 - 15198 (+)
Gene ID: MGYG000004860_20_15
Type: TC
Location: 15282 - 16667 (-)
Gene ID: MGYG000004860_20_16
Type: CAZyme
Location: 16704 - 17975 (-)
Gene ID: MGYG000004860_20_17
Type:
Location: 18369 - 18665 (-)
Gene ID: MGYG000004860_20_18
Type: TC
Location: 19016 - 20917 (+)
Gene ID: MGYG000004860_20_19
Type: CAZyme
Location: 21139 - 22128 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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