Cluster: MGYG000004860_CGC28
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004860
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004860_15 | MGYG000004860_15_27 | 29375 | 31720 | - | 3.A.3.23.2 |
| NULL(UNKNOWN) | MGYG000004860_15 | MGYG000004860_15_28 | 31928 | 32086 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004860_15 | MGYG000004860_15_29 | 32177 | 33025 | + | 8.A.5.1.4 |
| TC | MGYG000004860_15 | MGYG000004860_15_30 | 33538 | 35001 | + | 3.A.1.121.3 |
| pfam | MGYG000004860_15 | MGYG000004860_15_31 | 35082 | 35510 | - | HSP20 | ArsA_HSP20 |
| pfam | MGYG000004860_15 | MGYG000004860_15_32 | 35842 | 41901 | - | DUF5776 | KxYKxGKxW_sig |
| CAZyme | MGYG000004860_15 | MGYG000004860_15_33 | 42141 | 43199 | - | GT113 |
| TC | MGYG000004860_15 | MGYG000004860_15_34 | 43860 | 46250 | + | 3.A.5.10.1 |
| pfam | MGYG000004860_15 | MGYG000004860_15_35 | 46265 | 47500 | + | SecY |
| TC | MGYG000004860_15 | MGYG000004860_15_36 | 47513 | 49051 | + | 3.A.5.10.1 |
| TC | MGYG000004860_15 | MGYG000004860_15_37 | 49041 | 50624 | + | 3.A.5.10.1 |
| pfam | MGYG000004860_15 | MGYG000004860_15_38 | 50621 | 51373 | + | Sec-ASP3 |
| CAZyme | MGYG000004860_15 | MGYG000004860_15_39 | 51370 | 52818 | + | GT4 |
Gene ID: MGYG000004860_15_27
Type: TC
Location: 29375 - 31720 (-)
Type: TC
Location: 29375 - 31720 (-)
Gene ID: MGYG000004860_15_28
Type:
Location: 31928 - 32086 (+)
Type:
Location: 31928 - 32086 (+)
Gene ID: MGYG000004860_15_29
Type: TC
Location: 32177 - 33025 (+)
Type: TC
Location: 32177 - 33025 (+)
Gene ID: MGYG000004860_15_30
Type: TC
Location: 33538 - 35001 (+)
Type: TC
Location: 33538 - 35001 (+)
Gene ID: MGYG000004860_15_31
Type: pfam
Location: 35082 - 35510 (-)
Type: pfam
Location: 35082 - 35510 (-)
Gene ID: MGYG000004860_15_32
Type: pfam
Location: 35842 - 41901 (-)
Type: pfam
Location: 35842 - 41901 (-)
Gene ID: MGYG000004860_15_33
Type: CAZyme
Location: 42141 - 43199 (-)
Type: CAZyme
Location: 42141 - 43199 (-)
Gene ID: MGYG000004860_15_34
Type: TC
Location: 43860 - 46250 (+)
Type: TC
Location: 43860 - 46250 (+)
Gene ID: MGYG000004860_15_35
Type: pfam
Location: 46265 - 47500 (+)
Type: pfam
Location: 46265 - 47500 (+)
Gene ID: MGYG000004860_15_36
Type: TC
Location: 47513 - 49051 (+)
Type: TC
Location: 47513 - 49051 (+)
Gene ID: MGYG000004860_15_37
Type: TC
Location: 49041 - 50624 (+)
Type: TC
Location: 49041 - 50624 (+)
Gene ID: MGYG000004860_15_38
Type: pfam
Location: 50621 - 51373 (+)
Type: pfam
Location: 50621 - 51373 (+)
Gene ID: MGYG000004860_15_39
Type: CAZyme
Location: 51370 - 52818 (+)
Type: CAZyme
Location: 51370 - 52818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Levilactobacillus
Species
Levilactobacillus namurensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.