Cluster: MGYG000004860_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004860
- CGC Family ID: CGCFAM_08710
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004860_2 | MGYG000004860_2_88 | 80158 | 81531 | - | 2.A.2.3.3 |
| TF | MGYG000004860_2 | MGYG000004860_2_89 | 81859 | 82941 | - | GntR |
| TF | MGYG000004860_2 | MGYG000004860_2_90 | 83037 | 83927 | - | HTH_5 |
| CAZyme | MGYG000004860_2 | MGYG000004860_2_91 | 84201 | 85181 | + | GH43_26 |
| TC | MGYG000004860_2 | MGYG000004860_2_92 | 85199 | 86476 | + | 2.A.1.5.2 |
| CAZyme | MGYG000004860_2 | MGYG000004860_2_93 | 86582 | 88072 | + | GH51_1 |
| TC | MGYG000004860_2 | MGYG000004860_2_94 | 88495 | 90264 | - | 2.A.16.2.2 |
Gene ID: MGYG000004860_2_88
Type: TC
Location: 80158 - 81531 (-)
Type: TC
Location: 80158 - 81531 (-)
Gene ID: MGYG000004860_2_89
Type: TF
Location: 81859 - 82941 (-)
Type: TF
Location: 81859 - 82941 (-)
Gene ID: MGYG000004860_2_90
Type: TF
Location: 83037 - 83927 (-)
Type: TF
Location: 83037 - 83927 (-)
Gene ID: MGYG000004860_2_91
Type: CAZyme
Location: 84201 - 85181 (+)
Type: CAZyme
Location: 84201 - 85181 (+)
Gene ID: MGYG000004860_2_92
Type: TC
Location: 85199 - 86476 (+)
Type: TC
Location: 85199 - 86476 (+)
Gene ID: MGYG000004860_2_93
Type: CAZyme
Location: 86582 - 88072 (+)
Type: CAZyme
Location: 86582 - 88072 (+)
Gene ID: MGYG000004860_2_94
Type: TC
Location: 88495 - 90264 (-)
Type: TC
Location: 88495 - 90264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Levilactobacillus
Species
Levilactobacillus namurensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.