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Cluster: MGYG000004860_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004860_4 MGYG000004860_4_50 57074 58093 - GT2
CAZyme MGYG000004860_4 MGYG000004860_4_51 58083 59060 - GT4
CAZyme MGYG000004860_4 MGYG000004860_4_52 59072 60103 - GT4
pfam MGYG000004860_4 MGYG000004860_4_53 60108 61418 - Wzy_C
CAZyme MGYG000004860_4 MGYG000004860_4_54 61688 62440 - GT2
pfam MGYG000004860_4 MGYG000004860_4_55 62478 63395 - 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
TC MGYG000004860_4 MGYG000004860_4_56 63425 64078 - 9.B.18.1.3
pfam MGYG000004860_4 MGYG000004860_4_57 64100 64882 - CpsB_CapC
TC MGYG000004860_4 MGYG000004860_4_58 64879 65634 - 8.A.3.2.1
TC MGYG000004860_4 MGYG000004860_4_59 65646 66443 - 8.A.3.2.4
pfam MGYG000004860_4 MGYG000004860_4_60 66745 67746 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
TC MGYG000004860_4 MGYG000004860_4_61 67842 69581 - 3.A.1.129.1
TC MGYG000004860_4 MGYG000004860_4_62 69581 71314 - 3.A.1.129.1
peptidase MGYG000004860_4 MGYG000004860_4_63 71566 72714 + M78.UNW
pfam MGYG000004860_4 MGYG000004860_4_64 72831 73220 + DUF4411
TC MGYG000004860_4 MGYG000004860_4_65 73383 74393 - 3.D.4.3.2
TC MGYG000004860_4 MGYG000004860_4_66 74386 75837 - 3.D.4.3.2
pfam MGYG000004860_4 MGYG000004860_4_67 76568 77515 + 2-Hacid_dh | 2-Hacid_dh_C
NULL(UNKNOWN) MGYG000004860_4 MGYG000004860_4_68 77828 78142 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004860_4 MGYG000004860_4_69 78486 80438 - 2.A.2.2.1
CAZyme MGYG000004860_4 MGYG000004860_4_70 80787 83000 - GH36
Gene ID: MGYG000004860_4_50
Type: CAZyme
Location: 57074 - 58093 (-)
Gene ID: MGYG000004860_4_51
Type: CAZyme
Location: 58083 - 59060 (-)
Gene ID: MGYG000004860_4_52
Type: CAZyme
Location: 59072 - 60103 (-)
Gene ID: MGYG000004860_4_53
Type: pfam
Location: 60108 - 61418 (-)
Gene ID: MGYG000004860_4_54
Type: CAZyme
Location: 61688 - 62440 (-)
Gene ID: MGYG000004860_4_55
Type: pfam
Location: 62478 - 63395 (-)
Gene ID: MGYG000004860_4_56
Type: TC
Location: 63425 - 64078 (-)
Gene ID: MGYG000004860_4_57
Type: pfam
Location: 64100 - 64882 (-)
Gene ID: MGYG000004860_4_58
Type: TC
Location: 64879 - 65634 (-)
Gene ID: MGYG000004860_4_59
Type: TC
Location: 65646 - 66443 (-)
Gene ID: MGYG000004860_4_60
Type: pfam
Location: 66745 - 67746 (-)
Gene ID: MGYG000004860_4_61
Type: TC
Location: 67842 - 69581 (-)
Gene ID: MGYG000004860_4_62
Type: TC
Location: 69581 - 71314 (-)
Gene ID: MGYG000004860_4_63
Type: peptidase
Location: 71566 - 72714 (+)
Gene ID: MGYG000004860_4_64
Type: pfam
Location: 72831 - 73220 (+)
Gene ID: MGYG000004860_4_65
Type: TC
Location: 73383 - 74393 (-)
Gene ID: MGYG000004860_4_66
Type: TC
Location: 74386 - 75837 (-)
Gene ID: MGYG000004860_4_67
Type: pfam
Location: 76568 - 77515 (+)
Gene ID: MGYG000004860_4_68
Type:
Location: 77828 - 78142 (+)
Gene ID: MGYG000004860_4_69
Type: TC
Location: 78486 - 80438 (-)
Gene ID: MGYG000004860_4_70
Type: CAZyme
Location: 80787 - 83000 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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