Cluster: MGYG000004854_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004854
- CGC Family ID: CGCFAM_00220
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004854_11 | MGYG000004854_11_6 | 5879 | 7015 | - | GT4 |
| pfam | MGYG000004854_11 | MGYG000004854_11_7 | 7034 | 7909 | - | Epimerase |
| pfam | MGYG000004854_11 | MGYG000004854_11_8 | 7938 | 9230 | - | GARS_A | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4 |
| TC | MGYG000004854_11 | MGYG000004854_11_9 | 9223 | 10053 | - | 9.B.18.1.3 |
Gene ID: MGYG000004854_11_6
Type: CAZyme
Location: 5879 - 7015 (-)
Type: CAZyme
Location: 5879 - 7015 (-)
Gene ID: MGYG000004854_11_7
Type: pfam
Location: 7034 - 7909 (-)
Type: pfam
Location: 7034 - 7909 (-)
Gene ID: MGYG000004854_11_8
Type: pfam
Location: 7938 - 9230 (-)
Type: pfam
Location: 7938 - 9230 (-)
Gene ID: MGYG000004854_11_9
Type: TC
Location: 9223 - 10053 (-)
Type: TC
Location: 9223 - 10053 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905215965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.