Cluster: MGYG000004854_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004854
- CGC Family ID: CGCFAM_04109
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004854_5 | MGYG000004854_5_77 | 81984 | 83852 | - | GH13_39 |
| TF | MGYG000004854_5 | MGYG000004854_5_78 | 83896 | 84888 | - | HTH_3 |
| CAZyme | MGYG000004854_5 | MGYG000004854_5_79 | 85084 | 87492 | - | GT35 |
| NULL(UNKNOWN) | MGYG000004854_5 | MGYG000004854_5_80 | 87826 | 89019 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004854_5 | MGYG000004854_5_81 | 89518 | 90336 | + | Pro_isomerase |
| TC | MGYG000004854_5 | MGYG000004854_5_82 | 90543 | 91361 | + | 3.D.1.8.1 |
Gene ID: MGYG000004854_5_77
Type: CAZyme
Location: 81984 - 83852 (-)
Type: CAZyme
Location: 81984 - 83852 (-)
Gene ID: MGYG000004854_5_78
Type: TF
Location: 83896 - 84888 (-)
Type: TF
Location: 83896 - 84888 (-)
Gene ID: MGYG000004854_5_79
Type: CAZyme
Location: 85084 - 87492 (-)
Type: CAZyme
Location: 85084 - 87492 (-)
Gene ID: MGYG000004854_5_80
Type:
Location: 87826 - 89019 (-)
Type:
Location: 87826 - 89019 (-)
Gene ID: MGYG000004854_5_81
Type: pfam
Location: 89518 - 90336 (+)
Type: pfam
Location: 89518 - 90336 (+)
Gene ID: MGYG000004854_5_82
Type: TC
Location: 90543 - 91361 (+)
Type: TC
Location: 90543 - 91361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905215965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.