Cluster: MGYG000004854_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004854
- CGC Family ID: CGCFAM_01574
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004854_4 | MGYG000004854_4_11 | 12103 | 14097 | + | CBM79 |
| CAZyme | MGYG000004854_4 | MGYG000004854_4_12 | 14161 | 15138 | - | GH25 |
| peptidase | MGYG000004854_4 | MGYG000004854_4_13 | 15315 | 16031 | + | S14.UPW |
| TC | MGYG000004854_4 | MGYG000004854_4_14 | 16077 | 18602 | + | 3.A.12.1.1 |
| pfam | MGYG000004854_4 | MGYG000004854_4_15 | 18690 | 20591 | + | Radical_SAM_N | DUF3362 |
| TC | MGYG000004854_4 | MGYG000004854_4_16 | 20531 | 21478 | + | 3.A.11.1.4 |
Gene ID: MGYG000004854_4_11
Type: CAZyme
Location: 12103 - 14097 (+)
Type: CAZyme
Location: 12103 - 14097 (+)
Gene ID: MGYG000004854_4_12
Type: CAZyme
Location: 14161 - 15138 (-)
Type: CAZyme
Location: 14161 - 15138 (-)
Gene ID: MGYG000004854_4_13
Type: peptidase
Location: 15315 - 16031 (+)
Type: peptidase
Location: 15315 - 16031 (+)
Gene ID: MGYG000004854_4_14
Type: TC
Location: 16077 - 18602 (+)
Type: TC
Location: 16077 - 18602 (+)
Gene ID: MGYG000004854_4_15
Type: pfam
Location: 18690 - 20591 (+)
Type: pfam
Location: 18690 - 20591 (+)
Gene ID: MGYG000004854_4_16
Type: TC
Location: 20531 - 21478 (+)
Type: TC
Location: 20531 - 21478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905215965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.