Cluster: MGYG000004849_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004849
- CGC Family ID: CGCFAM_10648
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004849_1 | MGYG000004849_1_40 | 41854 | 42849 | + | GH130_7 |
| STP | MGYG000004849_1 | MGYG000004849_1_41 | 42954 | 43928 | + | GGDEF |
| pfam | MGYG000004849_1 | MGYG000004849_1_42 | 43989 | 45740 | + | ILVD_EDD_N | ILV_EDD_C |
| TC | MGYG000004849_1 | MGYG000004849_1_43 | 46071 | 48542 | - | 4.C.1.1.7 |
| NULL(UNKNOWN) | MGYG000004849_1 | MGYG000004849_1_44 | 48490 | 49002 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004849_1 | MGYG000004849_1_45 | 49122 | 50354 | + | HTH_AraC |
| TC | MGYG000004849_1 | MGYG000004849_1_46 | 50341 | 52155 | + | 8.A.59.2.1 |
| TC | MGYG000004849_1 | MGYG000004849_1_47 | 52307 | 53227 | + | 3.A.1.1.29 |
| TC | MGYG000004849_1 | MGYG000004849_1_48 | 53224 | 54105 | + | 3.A.1.1.29 |
| STP | MGYG000004849_1 | MGYG000004849_1_49 | 54145 | 55884 | + | SBP_bac_1 |
| CAZyme | MGYG000004849_1 | MGYG000004849_1_50 | 56028 | 58607 | + | PL15 |
| CAZyme | MGYG000004849_1 | MGYG000004849_1_51 | 58845 | 59834 | - | GH130_2 |
| CAZyme | MGYG000004849_1 | MGYG000004849_1_52 | 60145 | 61149 | + | GH18 |
Gene ID: MGYG000004849_1_40
Type: CAZyme
Location: 41854 - 42849 (+)
Type: CAZyme
Location: 41854 - 42849 (+)
Gene ID: MGYG000004849_1_41
Type: STP
Location: 42954 - 43928 (+)
Type: STP
Location: 42954 - 43928 (+)
Gene ID: MGYG000004849_1_42
Type: pfam
Location: 43989 - 45740 (+)
Type: pfam
Location: 43989 - 45740 (+)
Gene ID: MGYG000004849_1_43
Type: TC
Location: 46071 - 48542 (-)
Type: TC
Location: 46071 - 48542 (-)
Gene ID: MGYG000004849_1_44
Type:
Location: 48490 - 49002 (-)
Type:
Location: 48490 - 49002 (-)
Gene ID: MGYG000004849_1_45
Type: TF
Location: 49122 - 50354 (+)
Type: TF
Location: 49122 - 50354 (+)
Gene ID: MGYG000004849_1_46
Type: TC
Location: 50341 - 52155 (+)
Type: TC
Location: 50341 - 52155 (+)
Gene ID: MGYG000004849_1_47
Type: TC
Location: 52307 - 53227 (+)
Type: TC
Location: 52307 - 53227 (+)
Gene ID: MGYG000004849_1_48
Type: TC
Location: 53224 - 54105 (+)
Type: TC
Location: 53224 - 54105 (+)
Gene ID: MGYG000004849_1_49
Type: STP
Location: 54145 - 55884 (+)
Type: STP
Location: 54145 - 55884 (+)
Gene ID: MGYG000004849_1_50
Type: CAZyme
Location: 56028 - 58607 (+)
Type: CAZyme
Location: 56028 - 58607 (+)
Gene ID: MGYG000004849_1_51
Type: CAZyme
Location: 58845 - 59834 (-)
Type: CAZyme
Location: 58845 - 59834 (-)
Gene ID: MGYG000004849_1_52
Type: CAZyme
Location: 60145 - 61149 (+)
Type: CAZyme
Location: 60145 - 61149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp905214265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.