Cluster: MGYG000004845_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004845
- CGC Family ID: CGCFAM_00831
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004845_8 | MGYG000004845_8_24 | 48488 | 49624 | - | GH88 |
| STP | MGYG000004845_8 | MGYG000004845_8_25 | 49637 | 51241 | - | SBP_bac_1 |
| TC | MGYG000004845_8 | MGYG000004845_8_26 | 51262 | 52143 | - | 3.A.1.1.29 |
| TC | MGYG000004845_8 | MGYG000004845_8_27 | 52155 | 53132 | - | 3.A.1.1.10 |
| TF | MGYG000004845_8 | MGYG000004845_8_28 | 53407 | 55686 | + | HTH_AraC |
| pfam | MGYG000004845_8 | MGYG000004845_8_29 | 55779 | 56717 | + | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | MGYG000004845_8 | MGYG000004845_8_30 | 56772 | 58910 | - | GH36 |
Gene ID: MGYG000004845_8_24
Type: CAZyme
Location: 48488 - 49624 (-)
Type: CAZyme
Location: 48488 - 49624 (-)
Gene ID: MGYG000004845_8_25
Type: STP
Location: 49637 - 51241 (-)
Type: STP
Location: 49637 - 51241 (-)
Gene ID: MGYG000004845_8_26
Type: TC
Location: 51262 - 52143 (-)
Type: TC
Location: 51262 - 52143 (-)
Gene ID: MGYG000004845_8_27
Type: TC
Location: 52155 - 53132 (-)
Type: TC
Location: 52155 - 53132 (-)
Gene ID: MGYG000004845_8_28
Type: TF
Location: 53407 - 55686 (+)
Type: TF
Location: 53407 - 55686 (+)
Gene ID: MGYG000004845_8_29
Type: pfam
Location: 55779 - 56717 (+)
Type: pfam
Location: 55779 - 56717 (+)
Gene ID: MGYG000004845_8_30
Type: CAZyme
Location: 56772 - 58910 (-)
Type: CAZyme
Location: 56772 - 58910 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
UMGS1958
Species
UMGS1958 sp905215805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.