Cluster: MGYG000004845_CGC11
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004845
- CGC Family ID: CGCFAM_07892
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004845_4 | MGYG000004845_4_13 | 13039 | 15579 | + | 9.B.144.1.5 |
| TF | MGYG000004845_4 | MGYG000004845_4_14 | 15762 | 16595 | - | HTH_AraC | HTH_AraC |
| pfam | MGYG000004845_4 | MGYG000004845_4_15 | 16831 | 18225 | + | UxaC |
| CAZyme | MGYG000004845_4 | MGYG000004845_4_16 | 18302 | 22507 | + | PL1_2 |
| NULL(UNKNOWN) | MGYG000004845_4 | MGYG000004845_4_17 | 22504 | 22608 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004845_4 | MGYG000004845_4_18 | 22779 | 23792 | + | 3.A.1.1.10 |
| TC | MGYG000004845_4 | MGYG000004845_4_19 | 23814 | 24716 | + | 3.A.1.1.10 |
| STP | MGYG000004845_4 | MGYG000004845_4_20 | 24734 | 26512 | + | SBP_bac_1 |
| CAZyme | MGYG000004845_4 | MGYG000004845_4_21 | 26624 | 32794 | + | PL1_2 |
| pfam | MGYG000004845_4 | MGYG000004845_4_22 | 32888 | 35608 | + | SLH |
| pfam | MGYG000004845_4 | MGYG000004845_4_23 | 35623 | 39453 | + | SLH | SLH | SLH | aBig_2 | aBig_2 |
| CAZyme | MGYG000004845_4 | MGYG000004845_4_24 | 39526 | 40887 | + | GH28 |
| pfam | MGYG000004845_4 | MGYG000004845_4_25 | 41095 | 42465 | + | Mannitol_dh | Mannitol_dh_C |
| pfam | MGYG000004845_4 | MGYG000004845_4_26 | 42483 | 43895 | + | GD_AH_second | SAF | GD_AH_C |
| CAZyme | MGYG000004845_4 | MGYG000004845_4_27 | 43914 | 45446 | + | GH43_10 |
| CAZyme | MGYG000004845_4 | MGYG000004845_4_28 | 45467 | 46567 | + | GH105 |
| TC | MGYG000004845_4 | MGYG000004845_4_29 | 46859 | 47527 | + | 9.B.149.1.11 |
Gene ID: MGYG000004845_4_13
Type: TC
Location: 13039 - 15579 (+)
Type: TC
Location: 13039 - 15579 (+)
Gene ID: MGYG000004845_4_14
Type: TF
Location: 15762 - 16595 (-)
Type: TF
Location: 15762 - 16595 (-)
Gene ID: MGYG000004845_4_15
Type: pfam
Location: 16831 - 18225 (+)
Type: pfam
Location: 16831 - 18225 (+)
Gene ID: MGYG000004845_4_16
Type: CAZyme
Location: 18302 - 22507 (+)
Type: CAZyme
Location: 18302 - 22507 (+)
Gene ID: MGYG000004845_4_17
Type:
Location: 22504 - 22608 (+)
Type:
Location: 22504 - 22608 (+)
Gene ID: MGYG000004845_4_18
Type: TC
Location: 22779 - 23792 (+)
Type: TC
Location: 22779 - 23792 (+)
Gene ID: MGYG000004845_4_19
Type: TC
Location: 23814 - 24716 (+)
Type: TC
Location: 23814 - 24716 (+)
Gene ID: MGYG000004845_4_20
Type: STP
Location: 24734 - 26512 (+)
Type: STP
Location: 24734 - 26512 (+)
Gene ID: MGYG000004845_4_21
Type: CAZyme
Location: 26624 - 32794 (+)
Type: CAZyme
Location: 26624 - 32794 (+)
Gene ID: MGYG000004845_4_22
Type: pfam
Location: 32888 - 35608 (+)
Type: pfam
Location: 32888 - 35608 (+)
Gene ID: MGYG000004845_4_23
Type: pfam
Location: 35623 - 39453 (+)
Type: pfam
Location: 35623 - 39453 (+)
Gene ID: MGYG000004845_4_24
Type: CAZyme
Location: 39526 - 40887 (+)
Type: CAZyme
Location: 39526 - 40887 (+)
Gene ID: MGYG000004845_4_25
Type: pfam
Location: 41095 - 42465 (+)
Type: pfam
Location: 41095 - 42465 (+)
Gene ID: MGYG000004845_4_26
Type: pfam
Location: 42483 - 43895 (+)
Type: pfam
Location: 42483 - 43895 (+)
Gene ID: MGYG000004845_4_27
Type: CAZyme
Location: 43914 - 45446 (+)
Type: CAZyme
Location: 43914 - 45446 (+)
Gene ID: MGYG000004845_4_28
Type: CAZyme
Location: 45467 - 46567 (+)
Type: CAZyme
Location: 45467 - 46567 (+)
Gene ID: MGYG000004845_4_29
Type: TC
Location: 46859 - 47527 (+)
Type: TC
Location: 46859 - 47527 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
UMGS1958
Species
UMGS1958 sp905215805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.