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Cluster: MGYG000004843_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004843_8 MGYG000004843_8_28 29375 29818 + 4.A.6.1.16
pfam MGYG000004843_8 MGYG000004843_8_29 29818 30099 + YajC
TC MGYG000004843_8 MGYG000004843_8_30 30136 30618 + 4.A.6.1.4
TC MGYG000004843_8 MGYG000004843_8_31 30708 31508 + 4.A.6.1.4
TC MGYG000004843_8 MGYG000004843_8_32 31498 32580 + 4.A.6.1.4
TF MGYG000004843_8 MGYG000004843_8_33 32765 33496 + GntR
STP MGYG000004843_8 MGYG000004843_8_34 33611 34777 + SIS | SIS
CAZyme MGYG000004843_8 MGYG000004843_8_35 34896 36065 + CE9
Gene ID: MGYG000004843_8_28
Type: TC
Location: 29375 - 29818 (+)
Gene ID: MGYG000004843_8_29
Type: pfam
Location: 29818 - 30099 (+)
Gene ID: MGYG000004843_8_30
Type: TC
Location: 30136 - 30618 (+)
Gene ID: MGYG000004843_8_31
Type: TC
Location: 30708 - 31508 (+)
Gene ID: MGYG000004843_8_32
Type: TC
Location: 31498 - 32580 (+)
Gene ID: MGYG000004843_8_33
Type: TF
Location: 32765 - 33496 (+)
Gene ID: MGYG000004843_8_34
Type: STP
Location: 33611 - 34777 (+)
Gene ID: MGYG000004843_8_35
Type: CAZyme
Location: 34896 - 36065 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004843_8_29 vegan > omnivore 1.07369 0.01057

🧭 Explore Read Mapping of CGC

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