Cluster: MGYG000004843_CGC2
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004843
- CGC Family ID: CGCFAM_00413
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004843_1 | MGYG000004843_1_84 | 125080 | 126450 | + | 4.A.1.2.6 |
| peptidase | MGYG000004843_1 | MGYG000004843_1_85 | 126556 | 127536 | + | S09.UPC |
| pfam | MGYG000004843_1 | MGYG000004843_1_86 | 127660 | 128304 | + | DUF4867 |
| CAZyme | MGYG000004843_1 | MGYG000004843_1_87 | 128659 | 130089 | + | GH1 |
| pfam | MGYG000004843_1 | MGYG000004843_1_88 | 130389 | 131900 | - | Sde182_NH-like |
| peptidase | MGYG000004843_1 | MGYG000004843_1_89 | 132167 | 133504 | - | S09.UPW |
| TC | MGYG000004843_1 | MGYG000004843_1_90 | 133995 | 135422 | + | 4.A.1.2.11 |
| CAZyme | MGYG000004843_1 | MGYG000004843_1_91 | 135633 | 136946 | + | GH140 |
| TC | MGYG000004843_1 | MGYG000004843_1_92 | 137135 | 139903 | - | 3.A.3.4.1 |
Gene ID: MGYG000004843_1_84
Type: TC
Location: 125080 - 126450 (+)
Type: TC
Location: 125080 - 126450 (+)
Gene ID: MGYG000004843_1_85
Type: peptidase
Location: 126556 - 127536 (+)
Type: peptidase
Location: 126556 - 127536 (+)
Gene ID: MGYG000004843_1_86
Type: pfam
Location: 127660 - 128304 (+)
Type: pfam
Location: 127660 - 128304 (+)
Gene ID: MGYG000004843_1_87
Type: CAZyme
Location: 128659 - 130089 (+)
Type: CAZyme
Location: 128659 - 130089 (+)
Gene ID: MGYG000004843_1_88
Type: pfam
Location: 130389 - 131900 (-)
Type: pfam
Location: 130389 - 131900 (-)
Gene ID: MGYG000004843_1_89
Type: peptidase
Location: 132167 - 133504 (-)
Type: peptidase
Location: 132167 - 133504 (-)
Gene ID: MGYG000004843_1_90
Type: TC
Location: 133995 - 135422 (+)
Type: TC
Location: 133995 - 135422 (+)
Gene ID: MGYG000004843_1_91
Type: CAZyme
Location: 135633 - 136946 (+)
Type: CAZyme
Location: 135633 - 136946 (+)
Gene ID: MGYG000004843_1_92
Type: TC
Location: 137135 - 139903 (-)
Type: TC
Location: 137135 - 139903 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900556445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.