Cluster: MGYG000004843_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004843
- CGC Family ID: CGCFAM_00032
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004843_14 | MGYG000004843_14_53 | 48380 | 49915 | - | 2.A.66.1.40 |
| NULL(UNKNOWN) | MGYG000004843_14 | MGYG000004843_14_54 | 49915 | 51237 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004843_14 | MGYG000004843_14_55 | 51197 | 52147 | - | GT2 |
| CAZyme | MGYG000004843_14 | MGYG000004843_14_56 | 52131 | 52985 | - | GT2 |
| TC | MGYG000004843_14 | MGYG000004843_14_57 | 52982 | 53803 | - | 9.B.18.1.3 |
Gene ID: MGYG000004843_14_53
Type: TC
Location: 48380 - 49915 (-)
Type: TC
Location: 48380 - 49915 (-)
Gene ID: MGYG000004843_14_54
Type:
Location: 49915 - 51237 (-)
Type:
Location: 49915 - 51237 (-)
Gene ID: MGYG000004843_14_55
Type: CAZyme
Location: 51197 - 52147 (-)
Type: CAZyme
Location: 51197 - 52147 (-)
Gene ID: MGYG000004843_14_56
Type: CAZyme
Location: 52131 - 52985 (-)
Type: CAZyme
Location: 52131 - 52985 (-)
Gene ID: MGYG000004843_14_57
Type: TC
Location: 52982 - 53803 (-)
Type: TC
Location: 52982 - 53803 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900556445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.