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Cluster: MGYG000004842_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004842_11 MGYG000004842_11_11 8942 10066 + 3.A.1.2.5
TC MGYG000004842_11 MGYG000004842_11_12 10078 11685 + 3.A.1.2.5
TC MGYG000004842_11 MGYG000004842_11_13 11689 12858 + 3.A.1.2.5
TF MGYG000004842_11 MGYG000004842_11_14 12884 13978 + GntR
peptidase MGYG000004842_11 MGYG000004842_11_15 14095 15489 + S11.004
TC MGYG000004842_11 MGYG000004842_11_16 15579 16769 - 2.A.4.7.6
TF MGYG000004842_11 MGYG000004842_11_17 16785 17672 - HTH_AraC | HTH_AraC
CAZyme MGYG000004842_11 MGYG000004842_11_18 17904 20141 + GH146
pfam MGYG000004842_11 MGYG000004842_11_19 20737 23898 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme MGYG000004842_11 MGYG000004842_11_20 23910 26369 + GT35
Gene ID: MGYG000004842_11_11
Type: TC
Location: 8942 - 10066 (+)
Gene ID: MGYG000004842_11_12
Type: TC
Location: 10078 - 11685 (+)
Gene ID: MGYG000004842_11_13
Type: TC
Location: 11689 - 12858 (+)
Gene ID: MGYG000004842_11_14
Type: TF
Location: 12884 - 13978 (+)
Gene ID: MGYG000004842_11_15
Type: peptidase
Location: 14095 - 15489 (+)
Gene ID: MGYG000004842_11_16
Type: TC
Location: 15579 - 16769 (-)
Gene ID: MGYG000004842_11_17
Type: TF
Location: 16785 - 17672 (-)
Gene ID: MGYG000004842_11_18
Type: CAZyme
Location: 17904 - 20141 (+)
Gene ID: MGYG000004842_11_19
Type: pfam
Location: 20737 - 23898 (+)
Gene ID: MGYG000004842_11_20
Type: CAZyme
Location: 23910 - 26369 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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