Cluster: MGYG000004840_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004840
- CGC Family ID: CGCFAM_00769
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004840_10 | MGYG000004840_10_12 | 13656 | 15245 | - | 2.A.55.2.6 |
| pfam | MGYG000004840_10 | MGYG000004840_10_13 | 15582 | 18494 | - | Sulfatase |
| pfam | MGYG000004840_10 | MGYG000004840_10_14 | 18675 | 19748 | + | FtsX |
| TC | MGYG000004840_10 | MGYG000004840_10_15 | 19764 | 20438 | + | 3.A.1.122.4 |
| TC | MGYG000004840_10 | MGYG000004840_10_16 | 20563 | 22542 | + | 3.A.1.122.13 |
| NULL(UNKNOWN) | MGYG000004840_10 | MGYG000004840_10_17 | 22702 | 22935 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004840_10 | MGYG000004840_10_18 | 22977 | 23279 | - | HTH_5 |
| CAZyme | MGYG000004840_10 | MGYG000004840_10_19 | 23410 | 25413 | - | CBM50 | GH73 |
Gene ID: MGYG000004840_10_12
Type: TC
Location: 13656 - 15245 (-)
Type: TC
Location: 13656 - 15245 (-)
Gene ID: MGYG000004840_10_13
Type: pfam
Location: 15582 - 18494 (-)
Type: pfam
Location: 15582 - 18494 (-)
Gene ID: MGYG000004840_10_14
Type: pfam
Location: 18675 - 19748 (+)
Type: pfam
Location: 18675 - 19748 (+)
Gene ID: MGYG000004840_10_15
Type: TC
Location: 19764 - 20438 (+)
Type: TC
Location: 19764 - 20438 (+)
Gene ID: MGYG000004840_10_16
Type: TC
Location: 20563 - 22542 (+)
Type: TC
Location: 20563 - 22542 (+)
Gene ID: MGYG000004840_10_17
Type:
Location: 22702 - 22935 (+)
Type:
Location: 22702 - 22935 (+)
Gene ID: MGYG000004840_10_18
Type: TF
Location: 22977 - 23279 (-)
Type: TF
Location: 22977 - 23279 (-)
Gene ID: MGYG000004840_10_19
Type: CAZyme
Location: 23410 - 25413 (-)
Type: CAZyme
Location: 23410 - 25413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.