Cluster: MGYG000004840_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004840
- CGC Family ID: CGCFAM_03238
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004840_4 | MGYG000004840_4_2 | 1468 | 2979 | + | 2.A.118.1.6 |
| peptidase | MGYG000004840_4 | MGYG000004840_4_3 | 2995 | 4335 | + | M20.UPA |
| CAZyme | MGYG000004840_4 | MGYG000004840_4_4 | 4478 | 5935 | - | GH13_18 |
| TC | MGYG000004840_4 | MGYG000004840_4_5 | 5957 | 7180 | - | 2.A.1.68.1 |
| TC | MGYG000004840_4 | MGYG000004840_4_6 | 7443 | 8285 | - | 8.A.5.1.4 |
Gene ID: MGYG000004840_4_2
Type: TC
Location: 1468 - 2979 (+)
Type: TC
Location: 1468 - 2979 (+)
Gene ID: MGYG000004840_4_3
Type: peptidase
Location: 2995 - 4335 (+)
Type: peptidase
Location: 2995 - 4335 (+)
Gene ID: MGYG000004840_4_4
Type: CAZyme
Location: 4478 - 5935 (-)
Type: CAZyme
Location: 4478 - 5935 (-)
Gene ID: MGYG000004840_4_5
Type: TC
Location: 5957 - 7180 (-)
Type: TC
Location: 5957 - 7180 (-)
Gene ID: MGYG000004840_4_6
Type: TC
Location: 7443 - 8285 (-)
Type: TC
Location: 7443 - 8285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.