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Cluster: MGYG000004840_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004840_1 MGYG000004840_1_46 48386 49765 + 2.A.26.1.9
CAZyme MGYG000004840_1 MGYG000004840_1_47 49822 50415 - GH73
pfam MGYG000004840_1 MGYG000004840_1_48 50519 51298 - ABC_trans_CmpB
TC MGYG000004840_1 MGYG000004840_1_49 51311 52855 - 3.A.1.120.1
CAZyme MGYG000004840_1 MGYG000004840_1_50 53119 54159 + CBM50
pfam MGYG000004840_1 MGYG000004840_1_51 54471 55460 + ABC_sub_bind
TC MGYG000004840_1 MGYG000004840_1_52 55457 56353 + 3.A.1.34.1
TC MGYG000004840_1 MGYG000004840_1_53 56346 57110 + 3.A.1.34.1
NULL(UNKNOWN) MGYG000004840_1 MGYG000004840_1_54 57382 57651 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004840_1 MGYG000004840_1_55 57851 58168 - Thioredoxin | Thioredoxin_2
TC MGYG000004840_1 MGYG000004840_1_56 58175 58930 - 2.A.109.1.3
Gene ID: MGYG000004840_1_46
Type: TC
Location: 48386 - 49765 (+)
Gene ID: MGYG000004840_1_47
Type: CAZyme
Location: 49822 - 50415 (-)
Gene ID: MGYG000004840_1_48
Type: pfam
Location: 50519 - 51298 (-)
Gene ID: MGYG000004840_1_49
Type: TC
Location: 51311 - 52855 (-)
Gene ID: MGYG000004840_1_50
Type: CAZyme
Location: 53119 - 54159 (+)
Gene ID: MGYG000004840_1_51
Type: pfam
Location: 54471 - 55460 (+)
Gene ID: MGYG000004840_1_52
Type: TC
Location: 55457 - 56353 (+)
Gene ID: MGYG000004840_1_53
Type: TC
Location: 56346 - 57110 (+)
Gene ID: MGYG000004840_1_54
Type:
Location: 57382 - 57651 (-)
Gene ID: MGYG000004840_1_55
Type: pfam
Location: 57851 - 58168 (-)
Gene ID: MGYG000004840_1_56
Type: TC
Location: 58175 - 58930 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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