Cluster: MGYG000004837_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004837
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004837_34 | MGYG000004837_34_4 | 3073 | 3888 | + | GT2 |
| TC | MGYG000004837_34 | MGYG000004837_34_5 | 3885 | 5261 | + | 2.A.38.1.1 |
| TC | MGYG000004837_34 | MGYG000004837_34_6 | 5340 | 5726 | + | 1.A.22.1.1 |
Gene ID: MGYG000004837_34_4
Type: CAZyme
Location: 3073 - 3888 (+)
Type: CAZyme
Location: 3073 - 3888 (+)
Gene ID: MGYG000004837_34_5
Type: TC
Location: 3885 - 5261 (+)
Type: TC
Location: 3885 - 5261 (+)
Gene ID: MGYG000004837_34_6
Type: TC
Location: 5340 - 5726 (+)
Type: TC
Location: 5340 - 5726 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905207935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004837_34_4 | vegan > omnivore | 1.61763 | 0.00918 |
| MGYG000004837_34_4 | vegetarian > omnivore | 1.20749 | 0.03688 |
| MGYG000004837_34_5 | vegetarian > omnivore | 1.35474 | 0.01315 |
| MGYG000004837_34_6 | vegan > omnivore | 1.58532 | 0.00918 |
| MGYG000004837_34_6 | vegetarian > omnivore | 2.69890 | 0.03688 |