Cluster: MGYG000004837_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004837
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004837_14 | MGYG000004837_14_11 | 11673 | 11930 | + | 8.A.8.1.1 |
| TC | MGYG000004837_14 | MGYG000004837_14_12 | 12010 | 13737 | + | 8.A.7.1.1 |
| TC | MGYG000004837_14 | MGYG000004837_14_13 | 13797 | 14297 | + | 4.A.1.1.1 |
| pfam | MGYG000004837_14 | MGYG000004837_14_14 | 14371 | 15570 | + | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | MGYG000004837_14 | MGYG000004837_14_15 | 15691 | 18717 | + | GH2 |
Gene ID: MGYG000004837_14_11
Type: TC
Location: 11673 - 11930 (+)
Type: TC
Location: 11673 - 11930 (+)
Gene ID: MGYG000004837_14_12
Type: TC
Location: 12010 - 13737 (+)
Type: TC
Location: 12010 - 13737 (+)
Gene ID: MGYG000004837_14_13
Type: TC
Location: 13797 - 14297 (+)
Type: TC
Location: 13797 - 14297 (+)
Gene ID: MGYG000004837_14_14
Type: pfam
Location: 14371 - 15570 (+)
Type: pfam
Location: 14371 - 15570 (+)
Gene ID: MGYG000004837_14_15
Type: CAZyme
Location: 15691 - 18717 (+)
Type: CAZyme
Location: 15691 - 18717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905207935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004837_14_11 | vegetarian > omnivore | 1.16028 | 0.03688 |
| MGYG000004837_14_12 | vegan > omnivore | 1.16065 | 0.00918 |
| MGYG000004837_14_13 | vegan > omnivore | 2.28736 | 0.00918 |
| MGYG000004837_14_13 | vegetarian > omnivore | 1.54793 | 0.03688 |