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Cluster: MGYG000004837_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004837_11 MGYG000004837_11_19 15232 16113 + 3.A.1.15.4
TC MGYG000004837_11 MGYG000004837_11_20 16113 17009 + 3.A.1.15.4
TC MGYG000004837_11 MGYG000004837_11_21 17013 17864 + 3.A.1.15.4
TC MGYG000004837_11 MGYG000004837_11_22 17857 18690 + 3.A.1.15.4
pfam MGYG000004837_11 MGYG000004837_11_23 18750 19367 - DNA_alkylation | HEAT_2
pfam MGYG000004837_11 MGYG000004837_11_24 19393 20565 - MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
CAZyme MGYG000004837_11 MGYG000004837_11_25 20562 21605 - GH3
Gene ID: MGYG000004837_11_19
Type: TC
Location: 15232 - 16113 (+)
Gene ID: MGYG000004837_11_20
Type: TC
Location: 16113 - 17009 (+)
Gene ID: MGYG000004837_11_21
Type: TC
Location: 17013 - 17864 (+)
Gene ID: MGYG000004837_11_22
Type: TC
Location: 17857 - 18690 (+)
Gene ID: MGYG000004837_11_23
Type: pfam
Location: 18750 - 19367 (-)
Gene ID: MGYG000004837_11_24
Type: pfam
Location: 19393 - 20565 (-)
Gene ID: MGYG000004837_11_25
Type: CAZyme
Location: 20562 - 21605 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004837_11_21 vegan > omnivore 2.17815 0.00918
MGYG000004837_11_21 vegetarian > omnivore 1.31450 0.03688
MGYG000004837_11_22 vegan > omnivore 1.88862 0.00918
MGYG000004837_11_22 vegetarian > omnivore 1.27403 0.03688
MGYG000004837_11_24 vegan > omnivore 1.26309 0.00918
MGYG000004837_11_24 vegetarian > omnivore 1.04436 0.03688

🧭 Explore Read Mapping of CGC

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