Cluster: MGYG000004837_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004837
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004837_102 | MGYG000004837_102_4 | 1950 | 3968 | - | GT41 |
| pfam | MGYG000004837_102 | MGYG000004837_102_5 | 4008 | 5345 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | MGYG000004837_102 | MGYG000004837_102_6 | 5511 | 6227 | + | 9.B.20.2.2 |
Gene ID: MGYG000004837_102_4
Type: CAZyme
Location: 1950 - 3968 (-)
Type: CAZyme
Location: 1950 - 3968 (-)
Gene ID: MGYG000004837_102_5
Type: pfam
Location: 4008 - 5345 (-)
Type: pfam
Location: 4008 - 5345 (-)
Gene ID: MGYG000004837_102_6
Type: TC
Location: 5511 - 6227 (+)
Type: TC
Location: 5511 - 6227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905207935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004837_102_6 | vegetarian > omnivore | 1.65637 | 0.03688 |