Cluster: MGYG000004837_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004837
- CGC Family ID: CGCFAM_01708
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004837_69 | MGYG000004837_69_9 | 5378 | 6151 | - | 3.A.1.14.19 |
| TC | MGYG000004837_69 | MGYG000004837_69_10 | 6151 | 7200 | - | 3.A.1.14.5 |
| STP | MGYG000004837_69 | MGYG000004837_69_11 | 7216 | 8331 | - | Peripla_BP_2 |
| pfam | MGYG000004837_69 | MGYG000004837_69_12 | 8433 | 9572 | - | Cytochrom_C | CCP_MauG |
| CAZyme | MGYG000004837_69 | MGYG000004837_69_13 | 9652 | 10050 | - | GH103 |
Gene ID: MGYG000004837_69_9
Type: TC
Location: 5378 - 6151 (-)
Type: TC
Location: 5378 - 6151 (-)
Gene ID: MGYG000004837_69_10
Type: TC
Location: 6151 - 7200 (-)
Type: TC
Location: 6151 - 7200 (-)
Gene ID: MGYG000004837_69_11
Type: STP
Location: 7216 - 8331 (-)
Type: STP
Location: 7216 - 8331 (-)
Gene ID: MGYG000004837_69_12
Type: pfam
Location: 8433 - 9572 (-)
Type: pfam
Location: 8433 - 9572 (-)
Gene ID: MGYG000004837_69_13
Type: CAZyme
Location: 9652 - 10050 (-)
Type: CAZyme
Location: 9652 - 10050 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905207935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004837_69_11 | vegan > omnivore | 1.54106 | 0.00918 |
| MGYG000004837_69_11 | vegetarian > omnivore | 1.06815 | 0.03688 |