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Cluster: MGYG000004832_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004832_7 MGYG000004832_7_29 35516 36727 + 1.A.1.24.5
CAZyme MGYG000004832_7 MGYG000004832_7_30 36804 38054 + GH3
pfam MGYG000004832_7 MGYG000004832_7_31 38172 38633 - Y1_Tnp
pfam MGYG000004832_7 MGYG000004832_7_32 38817 40211 - tRNA-synt_2 | tRNA_anti-codon
TC MGYG000004832_7 MGYG000004832_7_33 40404 42023 - 3.A.1.1.16
pfam MGYG000004832_7 MGYG000004832_7_34 42027 43856 - BPD_transp_1 | BPD_transp_1
NULL(UNKNOWN) MGYG000004832_7 MGYG000004832_7_35 43977 45359 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004832_7 MGYG000004832_7_36 45570 46604 + 3.A.1.20.1
TC MGYG000004832_7 MGYG000004832_7_37 46601 48313 + 8.A.59.2.1
Gene ID: MGYG000004832_7_29
Type: TC
Location: 35516 - 36727 (+)
Gene ID: MGYG000004832_7_30
Type: CAZyme
Location: 36804 - 38054 (+)
Gene ID: MGYG000004832_7_31
Type: pfam
Location: 38172 - 38633 (-)
Gene ID: MGYG000004832_7_32
Type: pfam
Location: 38817 - 40211 (-)
Gene ID: MGYG000004832_7_33
Type: TC
Location: 40404 - 42023 (-)
Gene ID: MGYG000004832_7_34
Type: pfam
Location: 42027 - 43856 (-)
Gene ID: MGYG000004832_7_35
Type:
Location: 43977 - 45359 (-)
Gene ID: MGYG000004832_7_36
Type: TC
Location: 45570 - 46604 (+)
Gene ID: MGYG000004832_7_37
Type: TC
Location: 46601 - 48313 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004832_7_36 vegetarian > vegan 1.21798 0.00353

🧭 Explore Read Mapping of CGC

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