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Cluster: MGYG000004828_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004828_1 MGYG000004828_1_50 48690 50054 - 2.A.2.1.1
CAZyme MGYG000004828_1 MGYG000004828_1_51 50079 53084 - GH2
pfam MGYG000004828_1 MGYG000004828_1_52 53381 54787 + Radical_SAM | BATS
pfam MGYG000004828_1 MGYG000004828_1_53 54844 55584 - MORN_2 | MORN_2 | MORN_2 | MORN_2 | MORN_2 | MORN_2
TC MGYG000004828_1 MGYG000004828_1_54 55933 57354 - 2.A.114.1.4
TC MGYG000004828_1 MGYG000004828_1_55 57560 59227 + 9.B.33.1.1
TF MGYG000004828_1 MGYG000004828_1_56 59236 59958 + LytTR
TC MGYG000004828_1 MGYG000004828_1_57 60104 61534 + 2.A.3.7.2
pfam MGYG000004828_1 MGYG000004828_1_58 61582 62721 - Rep3_C
TC MGYG000004828_1 MGYG000004828_1_59 62966 64783 + 4.A.2.1.4
TC MGYG000004828_1 MGYG000004828_1_60 64841 65791 + 4.A.2.1.6
pfam MGYG000004828_1 MGYG000004828_1_61 65818 66609 - Hydrolase | Hydrolase_3 | PGP_phosphatase | Hydrolase_like | Hydrolase_6 | HAD_2
pfam MGYG000004828_1 MGYG000004828_1_62 66702 67574 - EamA | EamA
TC MGYG000004828_1 MGYG000004828_1_63 67696 68304 - 9.B.158.1.1
peptidase MGYG000004828_1 MGYG000004828_1_64 68315 69709 - M20.UPA
TC MGYG000004828_1 MGYG000004828_1_65 69763 70068 - 4.A.3.2.6
TC MGYG000004828_1 MGYG000004828_1_66 70090 71379 - 4.A.3.2.8
peptidase MGYG000004828_1 MGYG000004828_1_67 71402 72364 - T02.UPW
TC MGYG000004828_1 MGYG000004828_1_68 72385 72699 - 4.A.3.2.7
pfam MGYG000004828_1 MGYG000004828_1_69 72945 74063 + Rep3_C
TC MGYG000004828_1 MGYG000004828_1_70 74085 75380 + 2.A.35.1.5
Gene ID: MGYG000004828_1_50
Type: TC
Location: 48690 - 50054 (-)
Gene ID: MGYG000004828_1_51
Type: CAZyme
Location: 50079 - 53084 (-)
Gene ID: MGYG000004828_1_52
Type: pfam
Location: 53381 - 54787 (+)
Gene ID: MGYG000004828_1_53
Type: pfam
Location: 54844 - 55584 (-)
Gene ID: MGYG000004828_1_54
Type: TC
Location: 55933 - 57354 (-)
Gene ID: MGYG000004828_1_55
Type: TC
Location: 57560 - 59227 (+)
Gene ID: MGYG000004828_1_56
Type: TF
Location: 59236 - 59958 (+)
Gene ID: MGYG000004828_1_57
Type: TC
Location: 60104 - 61534 (+)
Gene ID: MGYG000004828_1_58
Type: pfam
Location: 61582 - 62721 (-)
Gene ID: MGYG000004828_1_59
Type: TC
Location: 62966 - 64783 (+)
Gene ID: MGYG000004828_1_60
Type: TC
Location: 64841 - 65791 (+)
Gene ID: MGYG000004828_1_61
Type: pfam
Location: 65818 - 66609 (-)
Gene ID: MGYG000004828_1_62
Type: pfam
Location: 66702 - 67574 (-)
Gene ID: MGYG000004828_1_63
Type: TC
Location: 67696 - 68304 (-)
Gene ID: MGYG000004828_1_64
Type: peptidase
Location: 68315 - 69709 (-)
Gene ID: MGYG000004828_1_65
Type: TC
Location: 69763 - 70068 (-)
Gene ID: MGYG000004828_1_66
Type: TC
Location: 70090 - 71379 (-)
Gene ID: MGYG000004828_1_67
Type: peptidase
Location: 71402 - 72364 (-)
Gene ID: MGYG000004828_1_68
Type: TC
Location: 72385 - 72699 (-)
Gene ID: MGYG000004828_1_69
Type: pfam
Location: 72945 - 74063 (+)
Gene ID: MGYG000004828_1_70
Type: TC
Location: 74085 - 75380 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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